KEGG   Saccoglossus kowalevskii (acorn worm): 100369178
Entry
100369178         CDS       T04123                                 
Name
(RefSeq) exosome complex component RRP45-like
  KO
K03678  exosome complex component RRP45
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100369178
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sko03019]
    100369178
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100369178
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 100369178
NCBI-ProteinID: XP_002734834
Position
Un
AA seq 394 aa
MCTMKKAAISNAEKDFILTCIKNRRRVDGRQAYDFRNAKISFGQDLGHCEVQLGDTRVLC
QVSCEIIEPRQNRPTEGGLYFNVELSPMASPLFEPGRQSEFGIEIIRFLEKTVRDSRAID
TESLCIVAGEKVWEIRIDIHVLNHDGNIMDCVTMAAVTALSHFRRPDVSVVGEDVQVHSA
ADRDPVSLSVHHLPVSVTFAYFDEGKYLLVDPTEREECVMDGSMILSMNIHRELCTAHMS
GDMLLVKDQIIRCTQTAIVKVSELTDLIKKALENDRKARASGNKCGFAETQRQQKVTYLK
RDVTEVDVSDKVEIPEITLDETEDSKDQAESLVVLGKGTVQVGEGGHNTWLVDDVQGVKP
VQQKRKKKKKHAAKKVKDAGSSEEEETVILVPDS
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgtgcactatgaagaaagcagctatatctaacgcagaaaaagattttattctgacatgt
attaagaataggcggagagttgatggcagacaagcttacgacttccgaaatgccaagata
tcatttggtcaagacttgggacactgtgaagttcaacttggagatacaagggtactatgt
caagtctcgtgtgaaataattgaacctcgtcagaatcgtccaacagaaggtggtttatat
tttaatgttgaactatcaccgatggcatcaccactatttgaacctggcagacaatctgag
tttggaattgagataatccgttttttagagaagactgtacgagattcccgagctattgat
acagaatccttgtgtattgtagcaggagaaaaggtatgggaaataagaatagatatacat
gtattaaatcatgatggtaatattatggattgtgttaccatggcagcagttacagcactg
tcgcattttcgccgtcctgacgtcagtgttgtgggagaagacgtacaagtacattcagca
gcagaccgggatcctgtttcactcagtgtacaccatcttcctgttagtgtcacatttgca
tattttgatgaagggaaatatttattggtagacccaactgaacgggaagagtgtgttatg
gatggtagcatgattctaagcatgaatattcacagagaattatgtacagcacacatgagt
ggtgatatgctgcttgtaaaagaccagattattaggtgtacacagactgcaattgtcaaa
gtgtcagaattaacagatcttataaaaaaagctttggaaaatgacagaaaagcaagggca
tctggaaacaagtgtggatttgcagaaactcagagacaacaaaaagttacttatcttaag
agggatgttactgaagtggatgtaagcgacaaggtagaaataccagaaataacactggat
gaaacagaagacagcaaagatcaagcagaatctttagtggtgctcggcaaaggtacggtt
caagtcggggaaggtggccataatacttggctggtagatgacgtgcaaggagtaaaacct
gtccaacagaaaaggaagaagaaaaaaaaacatgctgccaaaaaagtcaaagatgcaggt
agcagtgaggaggaggaaactgttattttagttcctgattcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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