KEGG   Saccoglossus kowalevskii (acorn worm): 100376439
Entry
100376439         CDS       T04123                                 
Name
(RefSeq) N-alpha-acetyltransferase 38, NatC auxiliary subunit-like
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03018  RNA degradation
sko03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100376439
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100376439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sko03019]
    100376439
   03041 Spliceosome [BR:sko03041]
    100376439
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100376439
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100376439
Spliceosome [BR:sko03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100376439
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 100376439
NCBI-ProteinID: XP_002739308
Position
Un
AA seq 96 aa
MASALEGYINHTISVVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IIRGDNIAVVGEIDDETDNSLDLANIKAEPLNPVVH
NT seq 291 nt   +upstreamnt  +downstreamnt
atggcgtcagcgttagaaggttatatcaaccacacaatttcagtggtgaccagtgatggg
cgaatgatagttggaaccttgaagggatttgaccagacaattaatttaatacttgatgaa
agccatgaaagagtgtttagttcatcccagggtgtagaacaagttgtattaggattgtat
attattaggggtgataacatagccgtagttggtgaaatagatgatgaaacggacaattct
ttagatcttgcaaatataaaagctgaacctctcaatccagtagtccattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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