KEGG   Sphingomonas koreensis: BRX40_08515
Entry
BRX40_08515       CDS       T04828                                 
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
skr  Sphingomonas koreensis
Pathway
skr00020  Citrate cycle (TCA cycle)
skr00190  Oxidative phosphorylation
skr00650  Butanoate metabolism
skr01100  Metabolic pathways
skr01110  Biosynthesis of secondary metabolites
skr01120  Microbial metabolism in diverse environments
skr01200  Carbon metabolism
Module
skr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
skr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
skr_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:skr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    BRX40_08515
   00650 Butanoate metabolism
    BRX40_08515
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    BRX40_08515
Enzymes [BR:skr01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     BRX40_08515
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C GIDA Thi4 DAO DUF917 Pyr_redox_2
Other DBs
NCBI-ProteinID: APR52471
UniProt: A0A1L6J935
Position
complement(1737872..1739674)
AA seq 600 aa
MSAAYKIIDHSYDAVVVGAGGSGLRATMGCAEAGLKTACITKVFPTRSHTVAAQGGIAAS
LGNNSPDHWTWHMFDTVKGSDWLGDQDAIEYMVREAPAAVIELEHAGVPFSRNDNGTIYQ
RPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYIEYFALDLIMENGA
CRGVIAMCMEDGSIHRFRSHAVVLATGGGGRVYQSATSAHTCTGDGNGMALRAGLALQDM
EFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVARSMAME
IREGRGVGKENDHIFLHLDHIDPKVLAERLPGITETGKIFANVDLTKKPLPVVPTVHYNM
GGIPTNYHGEVVQLRDGNPDAVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRATGL
RLKETLKPNTPHNPLPKGSEEFALTRLDHFRNAKGGSSTAEIRKDMQKTMQRHCAVFRDS
ALLSEGVQHMDQVYKRMGDIDVTDRSLIWNTDLIETLELDNLIGQALVTIKGAENRKESR
GAHMHEDFPDRDDANWMKHTVATFDGWGGKGGATSIDYRPVHEYTLTDEVEYIKPKKRVY
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgtccgcagcctacaagatcatcgaccacagctacgacgccgtcgtcgtgggtgccggc
ggttcgggcctgcgtgcgacgatgggctgtgccgaggccggcctcaagacagcctgcatc
accaaggtgttcccgacccgcagccataccgtggcggcgcagggcggcatcgccgcctcg
ctgggcaacaactcgccggaccactggacctggcacatgttcgacaccgtcaagggatcg
gactggctcggcgatcaggacgcgatcgaatatatggtgcgcgaggcgcccgcggccgtg
atcgagctcgagcatgccggcgtgccgttcagccgcaacgacaacggcacgatctaccag
cgcccgttcggcggccacatgcagaatatgggcgaaggccccccggtgcagcgcacctgc
gccgcggccgaccgtacgggccacgccatgctccacgcgctctaccagcagagcctgaag
tatgacgcggacttctacatcgaatatttcgcgctcgacctgatcatggaaaacggcgcc
tgccgcggcgtcatcgccatgtgcatggaagacggctcgatccaccgcttccgcagccat
gccgtcgtcctcgccaccggcggcggcggccgcgtctatcagtcggcgacctcggcgcac
acctgcaccggcgacggcaacggcatggcgctgcgcgccggcctcgcgctgcaggacatg
gagttcgtccagttccacccgaccggcatctacggcgcgggcgtgctgatcaccgagggt
gcgcgcggcgagggcggctatctcaccaactccgaaggcgagcgcttcatggagcgctat
gccccctccgccaaggatctcgccagccgcgacgtcgtcgcgcgctcgatggcgatggag
atccgcgagggccgcggcgtcggcaaggaaaacgaccacatcttccttcacctcgatcat
atcgatcccaaggtgctggccgagcgcctgcccggcatcaccgagaccggcaagatcttc
gcgaacgtcgacctgaccaagaagccgctgccggtggtgccgacggtccattacaacatg
ggcggtatcccgaccaactatcatggcgaggtcgtgcagttgcgcgacggcaaccccgac
gcggtcgtccccggcctgttcgcggtcggcgaagcagcctgcgtgtcggtgcatggcgcc
aaccgcctcggttccaactcgctgatcgacctcgtcgtgttcggccgcgccaccggcctg
cgcctcaaggagacgctcaagcccaacacgccgcacaacccgctgcccaagggttcggag
gagttcgcgctcacccggctcgaccatttccgcaacgccaagggcggatcgtcgacggcg
gagatccgcaaggacatgcagaagacgatgcagcgccattgcgccgtgttccgcgacagc
gcgctgttgtccgaaggcgtccagcacatggaccaggtctacaagcggatgggggacatc
gacgtcaccgaccgctcgctgatctggaacaccgacctgatcgagacgctggagctcgac
aatctgatcggccaggcgctggtcacgatcaagggcgccgagaaccgcaaggaaagccgc
ggcgctcacatgcacgaggacttcccggatcgcgacgacgcgaactggatgaagcacacc
gtcgccaccttcgatggctggggcggcaagggcggcgcgacgtcgatcgactatcgcccg
gtccacgaatacacgctcaccgacgaggtcgagtacatcaagccgaagaagcgggtgtat
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system