KEGG   Sugiyamaella lignohabitans: AWJ20_4003
Entry
AWJ20_4003        CDS       T05270                                 
Symbol
NUP116
Name
(RefSeq) FG-nucleoporin NUP116
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AWJ20_4003 (NUP116)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slb03019]
    AWJ20_4003 (NUP116)
   03036 Chromosome and associated proteins [BR:slb03036]
    AWJ20_4003 (NUP116)
Messenger RNA biogenesis [BR:slb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     AWJ20_4003 (NUP116)
Chromosome and associated proteins [BR:slb03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    AWJ20_4003 (NUP116)
SSDB
Motif
Pfam: Nucleoporin2 Nucleoporin_FG
Other DBs
NCBI-GeneID: 30036088
NCBI-ProteinID: XP_018733678
UniProt: A0A161HFC8
Position
C:complement(925146..927719)
AA seq 857 aa
MFGATNTSPFGATNNATNTGTGLFGSTNNNTATSPFGASTGTQSSLFGAKPATATGGMFG
SNTATTTNNAFGGTSNTGAFGSSGGFGTNTNTNSTSPFGSTFGANNNSTTNTGGGLFGQQ
AAKPAFGGFGATNNTATTSPFGTTTNNTSGGLFGQNNNAGNTGTGLFGANNTNTSSPFGS
ASSTTNAPAASSGFGGFGGTATQQQNKPAFGFGNSGTTNTTTTSPFGQSTTNTGTGLFGQ
TNTANTGGSGLFGNTSSQNTNTGTGLFGQNNTAGGATGTSGTGLFGQSNNNATSNTASPF
GGFGAANNQQNTGATTGGLFSNAAKPAGSLFGGGATTTAPATSGLFGGSTPGATATGSFG
VDGGANSAKPSLFGTAPAATAKPTTGLFGGANNPLGTRGTFGAPNDTTPRFGLAGNTSAQ
QQGTSLFGQAAKPSLFSQPSNASTNGGLSLSGSTGATQLNNSQLLASVDQNPYGNNPLFT
SVNGQQAQSQPGTPVATPLSTTPSSNRKKQGIVSAYKLAPKPLFSPRPRHVGSGSPGNRS
SIMGSSATGADDSINGDRTLGKLTRTGSNSPNAVANSVYSLHADEAILSSNAFSPHGSSV
RRLIIDRKRTPNNSLLLTDGRSVADESSQLLTPGPSNTSVLPGSIASLDLSETTIPGTPS
PNGALRTSVSPEKPFNRGMNNNGVANDSATTASAPAKPKPVLPDNEIVDEHGYWISPSQE
KLDHMSLKELEGVKNFTVGRKGFGFVRFDVPIDLSQYSSVFKQIPGRIVIFGKKSCVIYP
DTSSKPAPGSELNVKATISLEGVWIMTKDTREPVKDPNHPLYDKHLQRLKNLKFTTFVSW
DKETGTWVFKIDPSAES
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgtttggtgctaccaataccagtccatttggtgctactaataatgctaccaataccggt
actggtctttttggctctactaataataacacagccaccagtccttttggcgcatctact
ggtacacaaagctcattgtttggtgctaagcccgctactgccactggtggtatgtttggt
tccaacactgctaccactactaacaatgcttttggaggtacatccaacactggcgccttt
ggttcgagtggtggttttggtactaataccaacaccaactctacatcccctttcggctca
acttttggcgcaaacaataactcgactactaatacaggtggtggattgttcgggcaacag
gctgcaaaacctgcttttggtggattcggggcgactaataataccgccaccacttcacca
tttggtaccactactaataatacaagtggtggcctttttggtcaaaacaataatgcgggc
aacactggtacaggactatttggtgccaataatacaaatacatcgtctccttttggtagt
gctagcagcaccaccaatgcccctgcagcttcctcaggatttggtggtttcggtggcacc
gctactcaacagcaaaacaaaccagcttttggatttgggaattctggcactactaacacc
accaccacttctccatttggccaaagtactacaaacactggtactggcttgttcggccaa
accaatactgctaatactggaggtagtggactgtttggaaacacaagttctcagaatact
aatacgggaaccggcttgtttggccagaataacacagctggtggtgccacgggtacatca
ggcacaggactattcggtcaaagtaacaacaatgccactagtaatacagcaagtccattt
ggcggttttggtgctgcaaacaaccagcagaatactggggccacgactggcggccttttt
tcaaacgcagctaagccagctggtagtttgtttggaggtggtgccacaaccactgctcct
gctactagtggactatttggtggttctactcctggagcaactgcaactggtagttttggg
gttgatggtggtgcaaattctgctaagccttcgttgtttggtacagctcctgccgcaact
gccaaaccaactacaggattatttggaggtgctaataatcctctaggaactcgtggaacc
tttggagctcctaatgatactaccccaaggtttggtttggctggtaatacatcggctcag
cagcaaggtacctccctttttggccaggccgccaagccttcgctgttttctcaaccatca
aatgcttccacgaatggcggcttgtcacttagtggtagtacaggtgcaacccagctcaac
aacagtcaactacttgcgtctgttgaccaaaatccatatgggaacaaccccctgtttact
agtgttaatgggcagcaagctcaatcacagccaggaactcctgtcgccacccctctatcc
acaaccccttcatctaatagaaagaagcaaggcatagtttctgcatacaagcttgcacct
aagccattgttctcacctcgtccacgacatgttggatccgggtctccaggtaatcgctct
tctattatgggcagctcagcaactggtgctgatgacagtattaacggtgataggactctt
ggtaagctcactcgtacgggatccaacagtccaaatgctgttgcaaacagtgtctatagc
ttgcatgcggatgaagctattctctcctccaatgcattctcgccccatggatccagcgtt
agaaggcttattattgacaggaagcgcacacctaacaacagtctccttttgaccgatggc
cgttctgtggcagatgagtctagtcagttgttgacaccaggcccctcgaacacttcagtt
ctgcccggcagcattgccagtcttgacctgagtgagaccaccattcctggtactccttcg
cctaatggagcacttagaacgtcggtatctcctgaaaagccctttaaccgaggaatgaat
aataatggcgtagctaatgatagtgccacaacggctagtgcacctgcaaagccaaaacct
gttcttcctgataatgagattgtcgatgaacacggctactggatatctccatcacaagaa
aaactcgaccatatgtctcttaaggagctggagggtgtaaagaactttacagttggtcgt
aagggatttggtttcgttcgttttgatgtgccaattgacctaagtcaatactcaagcgtg
ttcaagcagattcctggtcgaattgttatttttgggaaaaagtcttgcgttatttatcct
gacacgtcaagcaagcctgctcctggtagcgagctgaatgtcaaagctaccatctcgcta
gaaggagtgtggatcatgactaaggatacacgtgagccagtcaaagacccgaaccaccct
ctctacgataaacacctccagagactcaaaaacctcaaattcacaacattcgtgtcatgg
gataaggagactggaacctgggtattcaaaatcgacccctctgctgagtcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (60)   

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