KEGG   Staphylococcus lugdunensis HKU09-01: SLGD_01239Help
Entry
SLGD_01239        CDS       T01177                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
slg  Staphylococcus lugdunensis HKU09-01
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:slg00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SLGD_01239
Enzymes [BR:slg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SLGD_01239
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SLGD_01239
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1280208..1281080
Genome map
AA seq 290 aa AA seqDB search
MPELPEVEHVKRGIEPFIINTIIKSVTFSSKVIDGKSDGKETIIKGINLDGFRQFTEGYK
IYKVERRSKYINIYIEKNQECRVLISHLGMAGGFFIVNHLDEIHAPNYRKHWHVIFHLSN
GKLLVYSDIRRFGEIRNVQALNNYASFKNMAPEPFDESALDHYLTYLNQPKVKHKPIKQL
ILDHKVIAGCGNIYACEALYRAAIHPATEVQSLNQQARQNLFLEVQAVLNEGIEYGGTSI
SDYRHADGKTGTMQLRLNVYKQQQCKKCGHKIEQQVIATRNSHFCPVCQK
NT seq 873 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattaccagaagttgaacatgttaaaagaggtattgaaccttttataattaac
acgattataaaatcagtaacattttcttcaaaagtcattgacggcaagtcagacgggaaa
gaaacaatcattaaagggattaatcttgatggttttaggcagtttacagagggttataaa
atatataaagtagagcgacgcagtaaatacattaatatttatattgaaaagaatcaggag
tgccgtgtattgattagtcatttaggaatggcaggtggtttttttatcgtaaatcattta
gatgagatacatgctccaaactatagaaaacattggcatgttatttttcatttaagtaat
ggtaaattacttgtttattcagatattcgacgttttggtgaaattagaaatgtacaagca
ctaaataattacgcatcgttcaaaaatatggcgcccgaaccttttgacgaaagcgcatta
gatcattatttgacttatttaaaccaacctaaagtaaagcacaaacctattaaacaatta
atccttgatcataaagttattgcaggttgtgggaatatctatgcttgtgaggcattatat
agagctgcaatacatcccgccactgaagtgcaaagcttaaatcagcaagcaagacaaaat
ctttttttagaagttcaagccgttttaaatgaaggtattgagtatggcggaacgagtatc
tcggattatcgtcatgcagatggtaagacaggcacgatgcagttacgcttaaatgtatat
aaacaacagcaatgtaaaaaatgtggacataaaatagaacagcaagtgattgctacacgt
aatagtcatttttgtccggtttgtcaaaaataa

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