KEGG   Staphylococcus lugdunensis HKU09-01: SLGD_01300
Entry
SLGD_01300        CDS       T01177                                 
Name
(GenBank) Exodeoxyribonuclease V alpha chain
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
slg  Staphylococcus lugdunensis HKU09-01
Pathway
slg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SLGD_01300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slg03400]
    SLGD_01300
Enzymes [BR:slg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     SLGD_01300
DNA repair and recombination proteins [BR:slg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SLGD_01300
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_4 SH3_13 UvrD_C_2 Viral_helicase1 AAA_11 HHH_5 AAA_22 HHH_3 AAA_14 AAA nSTAND3 T2SSE TsaE AAA_18 AAA_12 Rad17 PIF1 Mg_chelatase 5_3_exonuc AAA_16 AAA_28 NB-ARC AAA_17 AAA_29 RsgA_GTPase DUF815 NACHT SLFN-g3_helicase Zeta_toxin ABC_tran Helicase_RecD UvrD_C NTPase_1
Other DBs
NCBI-ProteinID: ADC87391
Position
1342663..1345050
AA seq 795 aa
MDNPTLFEPTMLKGTVEVILFQNQDNFYTVLKVDTIESNESFDTMPTVVGFFPNIVEGDV
YTFKGQVVAHPKYGKQLKADTFEKELPQTKDAIITYLSSDLFKGIGKKTAQNIVNTLGEN
AINDILAHPDILTKVSNLSKKKQEQIAQQIAANQESEKIMIHLHDLGFGPKLSMAIYQFY
QSETINVVDNNPYKLVYDIKGIGFNKADTLARNIGIDFNDPERLKAGILFTLEEECIKQG
HTYLPAETILKSAQTMLSTQGDEIIEIHQLEEMLQILMEEDKLILDQQKIAIPSLYYSEL
KSVQNLYRILTHTHKLNELEQSDLQLHIGEIEDSNEVHYAASQKEALQTAINSKIMLLTG
GPGTGKTTVIKGIVELYAEIHGLSLDYADYTDDDFPVVLAAPTGRASKRLQEATGLEAMT
IHRLIGWNQDTQPEDILDNEIKAKLIIIDEMSMVDTWLFHQFLNAVPLDAQIVFVGDEDQ
LPSVGPGQVFKDLIQSKKIPRVNLTEVYRQQDGSSIIELAHHMKQNESIDITKRYHDRSF
INCSAEQIPDVVKKVVSSAVSKGYDMSDIQVLAPMYKGSAGIKRLNQILQTILNPKEPDA
REIEFGDAAFRKGDKVLQLVNRPNDNIFNGDIGIIVGIFWAKENALNKDVIIVDFDGNEI
TFTRQDLIELTHAYCTSIHKSQGSEFPIVIMPVVKQYFRMLQKPILYTGLTRAKQSLVLL
GDPQAFDIGLKTNGQVRMTQLYDLLEAYFGHETQNSTDDNIIAKHKKDTLSAATIYQIDP
MINMNQMTPYDFIER
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggataaccctacactatttgaaccaacgatgttaaagggcaccgtcgaagttattttg
ttccaaaatcaagataatttctatactgtacttaaagttgataccattgaatctaatgaa
tcgttcgatacgatgccaacggttgtagggtttttcccaaatattgttgaaggcgacgta
tacacctttaaaggacaggttgttgcgcatccaaaatatggcaaacaactaaaagctgat
acatttgaaaaagaattaccacaaacgaaagatgctattattacctacttatcaagtgat
ttatttaaaggtattggtaaaaagacagcacaaaatattgttaatactttgggagaaaat
gcaataaatgatattttagctcatccagacatattaacaaaagtttcaaatctttctaaa
aagaaacaagagcaaattgcacaacaaatagcagccaatcaagaatcagaaaaaatcatg
atacacttacatgatttaggatttggccctaaactatcaatggcaatctatcagttttat
caaagtgaaacaataaacgtcgttgataataacccgtataaacttgtatatgatattaaa
ggaattggatttaataaagctgatacattagcacgtaatatcggcatcgactttaatgac
ccagaacgattaaaagctggcatattattcacactagaggaagaatgtattaaacaaggg
catacttatttacctgctgaaacaattcttaaatcagcacaaacaatgttaagtacgcaa
ggggatgaaataattgaaatacatcaacttgaagaaatgttgcaaattttaatggaagaa
gataagttgattcttgatcaacaaaaaattgccatccccagtctttactactcagaatta
aaaagcgtacaaaacttatatcgtatattaactcatacccataaattaaatgaacttgag
caatctgatttacagttgcatattggagagatagaagatagcaatgaagtacattatgct
gcatcacaaaaagaggctttacaaacagctataaactcaaaaatcatgttattaactggc
ggacctggaactggtaagacaactgtcattaaaggtattgtagagttatacgctgaaatt
catggactttctttagattatgcggattacactgatgatgatttcccagtagtattagca
gctcctacaggcagagcatcgaaacgtttacaagaagctactggcttagaggcaatgacc
atccaccgacttataggatggaatcaagatacacaaccagaagacattttagataatgaa
attaaagcaaaattaattatcatagatgaaatgtctatggttgacacttggttatttcat
cagtttttaaatgcggtacctttagatgcccaaattgtatttgttggagatgaagaccaa
ctgccttctgttgggcctggacaagtatttaaggacttaatccagtctaaaaaaatacca
cgtgtcaatttaactgaagtctaccgacaacaagatggttcaagtattattgaattagct
caccacatgaaacaaaacgaatccatagatattacaaaacgttatcatgatagaagcttc
attaattgtagtgcagaacaaattcctgacgttgttaagaaagtagtatccagtgcagtt
agtaaaggatatgacatgagtgatattcaagtacttgctcccatgtataaaggaagtgca
ggtattaaacgtttaaatcaaattctgcaaacaattttaaatcctaaagaaccagacgcc
cgtgaaattgaatttggtgatgctgcattccgcaaaggcgataaagtattacagttagta
aatcgtcctaatgacaatatttttaatggagatattggtattattgttggcattttttgg
gcaaaagaaaatgctttaaataaagatgttattatcgtcgattttgacggtaatgaaatt
acatttacacgacaagacttaattgaattaacgcatgcatattgcacttcgattcacaag
tcccaaggttcagaattcccaatcgttattatgcccgtagtgaaacaatattttagaatg
ttacaaaagcctattctttatactggtttgactagagctaaacaatctttagtattacta
ggggatccacaagcctttgacattggtcttaaaacaaatggtcaagttagaatgacgcaa
ttatatgatttattagaagcatattttggacacgaaacgcagaattctactgatgataat
atcatagctaaacataaaaaagatacattatcagcagcgacaatttatcaaatagatccg
atgattaacatgaatcaaatgacgccatatgactttattgaacgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (35)   
   Pfam (35)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system