KEGG   Sulfurovum lithotrophicum: YH65_05750
Entry
YH65_05750        CDS       T03877                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
slh  Sulfurovum lithotrophicum
Pathway
slh03420  Nucleotide excision repair
slh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:slh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    YH65_05750
   03430 Mismatch repair
    YH65_05750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slh03400]
    YH65_05750
Enzymes [BR:slh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     YH65_05750
DNA repair and recombination proteins [BR:slh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     YH65_05750
   MMR (mismatch excision repair)
    Other MMR factors
     YH65_05750
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_11 AAA_12 AAA_30 DEAD ResIII
Other DBs
NCBI-ProteinID: AKF24948
UniProt: A0A7U4M143
Position
complement(1167923..1169992)
AA seq 689 aa
MPLSTLNDEQLSAATAPLGQNLIIASAGTGKTSTIVGRIAHLLNEGMDPSKILLLTFTNK
AAGEMIARLERYFPKKVVSRIESGTFHAVSYRWLKELHPHLALKQPSELKTLFRSIYEKR
NFERMNLPLSPFSATYLYEMYSLYQNASLEGFDEWFLEKYPEHEVIMDAYMDIVQEFEQE
KIDYGFASFNDLLLRMKSHLEENTIHFEEVLVDEYQDTNTLQGALIDTLKPRSLFCVGDY
DQSIYAFNGANIENIATFSKRYPDANVFTLKTNYRSTAPILSLANRVIERNERIYPKKLE
VGRHGKTHPPRLLMYKDLFEQYQAIAQSIKHTHVPNDSIAVVFRNNSSADGIEASLREVG
IPCKRKGGTSFFDAKEIKFLLDLLSLLVNPKDMMAFIHIFEYASGVGSALSKEFFQCFLH
FGNGDFMQGVLYPINSELPKLNPNKNVQLGLFDDDHDIGSATRFKHLDLPHYVYGHPLLK
HPKIIQDGVKFFNDFYRLMNEIKSEKNPAKILRTAISSKLYNGIIEMLSIQRGRLKTGEV
DEEKKKVARERIYRKANLLLDLSRQYRELGRFVNAMVLGGGELSEGEGVNLLTVHASKGL
EFPEVYVVDLVDGRFPNRKMMSSIEEERRLFYVAVTRAKDKLYLSLAQYDKVKKIDYKPS
QFLHEAGLIKGEFVEPEPKKKGVKKTVEA
NT seq 2070 nt   +upstreamnt  +downstreamnt
ttgccactcagcacactcaacgatgaacagctcagcgctgccactgcacctctgggacag
aatctcattattgccagtgcagggacagggaaaacttcgaccattgtcggacgtattgcc
catcttttgaatgaagggatggacccctcgaagatcctactgctgacctttaccaataaa
gccgcaggagagatgatcgcccgtctggaacgctattttcccaaaaaagtcgtatcgcgt
attgagtcaggtacgtttcatgccgtctcctaccgatggctcaaagaactgcacccccac
cttgcgctcaaacagccttcagaacttaaaacacttttcaggagtatttacgaaaaacga
aattttgagcgtatgaacctgcctttgtcaccattttcagccacctacctctacgagatg
tactccctataccagaatgcctctcttgagggatttgatgagtggtttttggaaaagtac
ccagaacatgaagtgatcatggatgcctatatggatattgtgcaggagtttgagcaggag
aagatcgattacggttttgcttcgttcaatgacctgctgctgcgtatgaaaagccatctt
gaggagaacaccatacactttgaagaggtgctggtagatgaataccaggataccaacacg
cttcagggtgcgctcatcgatacgctcaaaccacgttcgcttttttgcgtcggggattat
gatcagagtatttacgcctttaatggtgcgaatatagaaaatatcgctaccttttccaag
cgataccccgatgccaatgtttttacgctcaaaacgaattaccgctctactgcccccatt
ctttctcttgccaacagggttatagaacgcaacgaacgcatttaccccaaaaaacttgaa
gtagggcgtcacggaaagacacatccaccaaggctgctgatgtacaaagacctctttgaa
cagtatcaggctattgcacagagtatcaaacatacccatgtccccaatgacagtattgca
gtggtcttccgcaacaactcttctgccgacgggatcgaagcaagcctcagagaagtaggg
atcccatgcaaacgaaagggtggaacaagttttttcgatgccaaagagatcaaatttctc
ctcgatctactctccctgctggtcaatcccaaggatatgatggcgttcatacatattttt
gaatacgcttcgggcgttggttccgcactctcaaaagagttttttcagtgttttcttcat
tttggcaatggtgattttatgcagggcgtgctctacccgatcaattcggagctgcccaaa
ctcaatccgaacaagaatgtccagcttgggctctttgacgatgaccatgatatcggttcg
gccacgcgtttcaaacatcttgacctgccgcactatgtttacggccatccgctgctaaag
cacccgaagatcattcaggacggtgtaaagttcttcaatgatttctacagactgatgaat
gagatcaagtccgagaagaatcctgccaagattctccggacagccatttcatccaaactc
tacaacgggataattgaaatgctctcgatacagagagggcgtcttaaaacaggggaagtg
gatgaagagaaaaaaaaggttgcaagagagcgcatttaccgtaaagccaacctgctgctt
gacctctcgcgacaatacagggaattgggacgatttgtcaatgccatggtgcttggagga
ggggaactcagcgaaggggaaggggtaaatctgcttacggtacacgcaagtaagggcctg
gaattcccggaagtttatgtggtcgacctggtggacggccgtttccccaacagaaagatg
atgagcagcattgaagaagagcgaaggctgttttatgtggctgtcacacgggcaaaagat
aaactttacctttctctggcccaatacgacaaagtcaaaaagatcgactacaagccttcg
cagttcctgcatgaagcaggcttgatcaaaggggagttcgttgaaccggagcctaaaaag
aagggagtgaagaaaacagtggaagcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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