KEGG   Spirosoma linguale: Slin_5592Help
Entry
Slin_5592         CDS       T01156                                 

Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sli  Spirosoma linguale
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sli00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Slin_5592
Enzymes [BR:sli01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Slin_5592
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Slin_5592
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(6807740..6808555)
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEIRRQYLETSSLYQPVSHIEVEDKKLLTTDLATLQQALIGRQFTGTRRVGKNL
FIFTDAPDVIIHMHFGMTGDLEYYHASLDRPRFARIVFEFTSGFNLGFLCPRKFERVGLV
TDVDAFLLRKKIGEDGLDISLETLSDRVRRKKAFIKPVLLDQSVVAGLGNWIVDEVLFQA
LIHPEQRADTLTNDQMASLHIAIRLVLETAIRYEATYRDFPIGFLIHVREWDDSPYDDVE
AHKYCPRCKTRIERSVVGGRTTFFCPKEQCV
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattaccagaggttgaaatcagacgccaatatctcgaaacatcctctctctac
cagcccgttagccatatagaggtggaagacaaaaaacttcttacaaccgatctggctaca
ctgcaacaggctcttatcgggcggcaatttaccggtacccgccgggtcggtaaaaatctg
ttcatttttaccgatgcgcccgatgtcattatccatatgcactttggcatgaccggcgat
ttggaatattaccacgcatctctcgaccggccccgctttgcccgaatcgtgttcgaattt
acgtcgggtttcaaccttggctttctgtgcccccgaaaattcgaacgcgttggcctcgtt
acagacgtcgacgcctttctgttgcgcaaaaagattggtgaggatggcctcgacatttcg
ctggaaaccctaagcgaccgcgttcgccggaaaaaggccttcatcaaacctgttctgctc
gaccagagcgtagtggccggtttgggcaactggattgtcgacgaggtgttgtttcaggca
ttgatccatcctgaacaacgcgccgacaccctcaccaatgaccagatggccagcctccac
atagctattcggctggtactcgaaacggccattcgctacgaagccacgtatcgggacttt
cctattggttttttgatccacgttcgtgagtgggatgattctccttatgatgatgtggaa
gcgcacaagtactgcccccgttgcaaaacccgtattgaacgctcggtggtgggtggccga
accacgttcttctgcccgaaagagcaatgtgtttag

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