KEGG   Spiroplasma litorale: SLITO_v1c04390
Entry
SLITO_v1c04390    CDS       T04047                                 
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 component
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sll  Spiroplasma litorale
Pathway
sll00010  Glycolysis / Gluconeogenesis
sll00020  Citrate cycle (TCA cycle)
sll00260  Glycine, serine and threonine metabolism
sll00280  Valine, leucine and isoleucine degradation
sll00620  Pyruvate metabolism
sll00630  Glyoxylate and dicarboxylate metabolism
sll00640  Propanoate metabolism
sll00785  Lipoic acid metabolism
sll01100  Metabolic pathways
sll01110  Biosynthesis of secondary metabolites
sll01120  Microbial metabolism in diverse environments
sll01200  Carbon metabolism
sll01210  2-Oxocarboxylic acid metabolism
sll01240  Biosynthesis of cofactors
Module
sll_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:sll00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SLITO_v1c04390 (pdhD)
   00020 Citrate cycle (TCA cycle)
    SLITO_v1c04390 (pdhD)
   00620 Pyruvate metabolism
    SLITO_v1c04390 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    SLITO_v1c04390 (pdhD)
   00640 Propanoate metabolism
    SLITO_v1c04390 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SLITO_v1c04390 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    SLITO_v1c04390 (pdhD)
   00310 Lysine degradation
    SLITO_v1c04390 (pdhD)
   00380 Tryptophan metabolism
    SLITO_v1c04390 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SLITO_v1c04390 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sll04147]
    SLITO_v1c04390 (pdhD)
Enzymes [BR:sll01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SLITO_v1c04390 (pdhD)
Exosome [BR:sll04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SLITO_v1c04390 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox Pyr_redox_3 GIDA Biotin_lipoyl_2 AlaDh_PNT_C FAD_oxidored HlyD_3 FAD_binding_2 NQRA PTS_EIIA_1 NAD_binding_8 RnfC_N HlyD_D23 HI0933_like GCV_H 3HCDH_N RP854
Other DBs
NCBI-ProteinID: AKX34092
UniProt: A0A0K1W1W1
Position
494608..496485
AA seq 625 aa
MFKVKFADIGEGLTEGTVTEIHVKKGDNVKSGDPLFNVETDKVNSDIFAPTDGKISKILI
SQGQEIKVGDVVIEIDDGKDLKDTKSEPIEENASVVGSTPVSNDLLKRGRKIQISKNISE
NEVVNKVNSILDGHTPNVFINNTENDLRPAPKYSPKIIENHFDVIMVGAGVGGYVGAIKC
SRLGLKTLIIEKQNYGGVCLNIGCIPTKTLLKSADLYEQIIKSEKYGIKVDLKAVKADWK
AIQERKIDVVSKLTNGVKGLLKKNNVNIVEGEAKALDKNTIEVNKKIYTCDNLIIATGSV
PNSMNLPGAKEAIESGFLVDSTGALALPKIPKKLVIIGGGVIGVEFACVYKRLGAKVTIL
QFLPTILEMLDSDVSKEMTKELMNRGNLEIITGASTKEFKGNSVIYEKDGKTFTIEADYC
LQSVGRKTVTTGFDNIGLNKNERNHIIINDHCETNIDGVYAIGDVTGKMMLAHVASYQGL
IAANRIAKRLGNKDAEDIIMNYNKVPSCIYTHPEVAMIGKTEDQLKKEGIEYKAYKFPFA
AIGKALADGNTTGFVKLICEPKYKEVIGAHIIANTATDMISEITTLMEAEGTITELSKAI
HPHPTLSEAVWEAAEALEFGKPINF
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgtttaaagtaaaatttgcagatattggagaaggtttaaccgaaggaactgttacagaa
atacatgtaaaaaaaggtgataatgttaaaagtggagacccattatttaatgttgaaact
gataaagttaattcagacatttttgcaccaactgatggtaagatatcaaaaatcttgata
tcacaaggtcaagaaataaaagttggtgatgttgtaatagaaattgatgatggaaaagat
ttaaaagatactaaaagtgagccgattgaagaaaatgcttcagttgttgggtcaactcca
gtttcaaatgatctattaaaaagaggacgtaaaatacagatatcaaaaaacattagtgaa
aatgaagttgttaataaagttaatagtattttagatggtcatacacctaatgtttttatt
aataatacagaaaatgaccttagacctgcacctaaatattcaccaaaaatcattgaaaat
cattttgacgtaattatggttggtgctggagttggaggatatgttggtgcaattaaatgc
tctagactaggtcttaaaactcttataattgaaaagcaaaattatggtggagtttgttta
aatatcggttgtattccgacaaaaacattactaaaatcagcagatttatatgaacaaata
ataaaatctgaaaaatatggtataaaagttgatttaaaagcagttaaagcagattgaaag
gcaatccaagaaagaaaaatcgacgtagtatcaaaattaactaatggtgttaaaggtttg
cttaaaaaaaataatgtaaatattgtagaaggtgaagcaaaagcattagataaaaataca
atagaagtaaataaaaaaatatacacatgtgataatttaataattgcgacgggtagtgtt
ccaaatagcatgaatttgccaggcgcaaaagaagctattgaaagtggttttttggttgac
tcaactggagcgttggcattacctaaaattcctaaaaaattagtcataattggtggcggt
gtaattggtgttgagtttgcttgtgtttataaaagacttggagccaaggtaacaatactt
caatttctaccaactattttagaaatgttagatagtgatgtttctaaagaaatgacaaaa
gagttaatgaatagaggaaatttggagataataactggtgcttcaactaaagaatttaaa
ggcaactcagttatatatgaaaaagatggtaaaacatttacaattgaagctgattattgt
ttacaatcagttggtagaaaaactgttacaacaggttttgacaatattggtttaaataaa
aatgaaagaaatcacataattataaatgatcactgtgaaacaaatatcgatggagtttat
gcaattggtgatgttactggaaaaatgatgttagcacatgttgcttcttatcaaggctta
attgcagcaaatagaattgcaaaaagacttggcaataaagatgcagaagacatcattatg
aactataataaagtaccaagttgtatatacactcacccagaagttgcgatgattggtaaa
actgaagaccaactaaaaaaagaaggcattgaatacaaagcgtataaatttccttttgca
gcaataggaaaagcactagctgatggtaatacaacaggttttgtgaaactaatttgtgaa
ccaaagtataaagaagttattggcgcacatataattgcaaacactgcaactgatatgata
tctgaaattacaactttgatggaagcagaaggaacaattactgaattatcaaaagcaata
cacccgcatccaactttaagtgaggcagtatgagaagcggcagaagctcttgaatttgga
aaaccaattaatttctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (21)   
   KEGG PATHWAY (14)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (87)   

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