KEGG   Stenotrophomonas sp. LM091: BIZ42_16860
Entry
BIZ42_16860       CDS       T04630                                 
Name
(GenBank) polynucleotide adenylyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
slm  Stenotrophomonas sp. LM091
Pathway
slm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BIZ42_16860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slm03019]
    BIZ42_16860
Enzymes [BR:slm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     BIZ42_16860
Messenger RNA biogenesis [BR:slm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     BIZ42_16860
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd DUF3136
Other DBs
NCBI-ProteinID: AOX63711
UniProt: A0A1D8YDV4
Position
3782649..3784016
AA seq 455 aa
MGNPENSTGSANINSSATSPFSLRVIPRDQHNISRKDISPNALRVLYRLRDSGFAGYLVG
GAVRDLLVNGHPKDFDVATDATPEQVKQLFRNCRLIGRRFRLAHVVFGREIIEVATFRAN
IDDGSGDREMENGMLVRDNVYGSIEDDAIRRDFTCNALYYAIEDFSVRDYTGGFEDVQAR
LMKLIGDPEQRYREDPVRMLRAVRLAAKLGFQIEEATAEPLPRLANLLAEAAPARLFEEV
LKLFLSGHGVASFEGLERYGLLDVMFPESAAALRSNRSGALRRMVIEGLHNTDLRVANDE
PVSPSFLFALLLWPAFCRALASLQKQGVALEEAQRRAADRVTLHQLTTIALPRRFSLPMQ
EIWLLQGRFSSRQRKRVIRTLTHPRFRAAYDFLVLRQVASSEHEADVAFWREAQLQSGTE
LDSALDAAQADGEGEDGAPRKRRRRRRRPGGVAGE
NT seq 1368 nt   +upstreamnt  +downstreamnt
ttgggcaatcccgaaaactcaaccggaagcgccaacatcaattcctctgctacatcaccg
ttcagcctgcgcgtgatcccgcgcgatcagcacaacatctcccgcaaggacatcagcccc
aacgccctgcgcgttctgtaccggctgcgtgattccgggtttgccggttacctggtcggc
ggcgccgtccgcgatctgctggtgaacggccaccccaaggatttcgacgttgccaccgac
gcgacgcccgagcaggtcaagcagttgttccgcaactgccgactgatcggccgccgcttc
cgcctggcgcacgtggtgttcggccgcgagatcatcgaggtcgccaccttccgcgccaac
atcgacgatggcagcggcgaccgtgagatggaaaacggcatgctcgtgcgcgacaacgtg
tacggcagcatcgaagacgacgcgatccgccgtgacttcacctgcaacgccctgtactac
gcgatcgaggatttctcggtgcgcgattacaccggcggctttgaagacgtgcaggcccgc
ctgatgaagctgatcggcgaccccgagcagcgctaccgcgaagacccggtgcgcatgctg
cgcgcggtccgtttggcggccaaactgggcttccagatcgaagaggcgaccgccgagccg
ctgccgcgcctggccaacctcctggccgaggccgccccggcgcgcctgttcgaagaagtg
ctcaagctgttcctgtccgggcacggcgtggccagcttcgaaggcctggagcgctatggc
ctgctcgacgtgatgttcccggaaagcgccgcggcgctgcgcagcaaccgcagtggcgcg
ttgcgccggatggtcatcgaaggcctgcacaacaccgacctgcgcgtggccaatgacgag
ccggtgtcgccgtcgttcctgttcgcgctgctgctgtggccggctttctgccgcgccctg
gccagcctgcagaagcagggtgtcgcgctggaagaagcccagcgccgcgccgctgatcgc
gtgaccctgcaccagctgaccacgatcgcgctgccgcgccgcttctcgctgccgatgcag
gagatctggctgctgcagggccgcttcagttcgcgccagcgcaagcgggtgatccgcacg
ctgacccatccgcgcttccgtgccgcctacgacttcctggtcctgcgccaggtcgcctcc
agcgagcacgaagccgatgtcgcgttctggcgcgaagcgcagctgcagtccggcacggag
ctggattcggcgctggatgccgcccaggccgacggtgagggcgaagacggtgcaccgcgc
aagcgtcgtcgccgccgccgtcgtcccggtggagtggcaggcgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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