KEGG   Staphylococcus lugdunensis N920143: SLUG_12370Help
Entry
SLUG_12370        CDS       T01951                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sln  Staphylococcus lugdunensis N920143
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:sln00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    SLUG_12370
Enzymes [BR:sln01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SLUG_12370
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SLUG_12370
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1309798..1310670
Genome map
AA seq 290 aa AA seqDB search
MPELPEVEHVKRGIEPFIINTIIKSVTFSSKVIDGKSDGKETIIKGINLDGFRQFTEGYK
IYKVERRSKYINIYIEKNQECRVLISHLGMAGGFFIVNHLDEIHAPNYRKHWHVIFHLSN
GKLLVYSDIRRFGEIRNVQALNNYASFKNMAPEPFDESALDHYLTYLNQPKVKHKPIKQL
ILDHKVIAGCGNIYACEALYRAAIHPATEVQSLNQQARQNLFLEVQAVLNEGIEYGGTSI
SDYRHADGKTGTMQLRLNVYKQQQCKKCGHKIEQQVIATRNSHFCPVCQK
NT seq 873 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattaccagaagttgaacatgttaaaagaggtattgaaccttttataattaac
acgattataaaatcagtaacattttcttcaaaagtcattgacggcaagtcagacgggaaa
gaaacaatcattaaagggattaatcttgatggttttaggcagtttacagagggttataaa
atatataaagtagagcgacgcagtaaatacattaatatttatattgaaaagaatcaggag
tgccgtgtattgattagtcatttaggaatggcaggtggtttttttatcgtaaatcattta
gatgagatacatgctccaaactatagaaaacattggcatgttatttttcatttaagtaat
ggtaaattacttgtttattcagatattcgacgttttggtgaaattagaaatgtacaagca
ctaaataattacgcatcgttcaaaaatatggcgcccgaaccttttgacgaaagcgcatta
gatcattatttgacttatttaaaccaacctaaagtaaagcacaaacctattaaacaatta
atccttgatcataaagttattgcaggttgtgggaatatctatgcttgtgaggcattatat
agagctgcaatacatcccgccactgaagtgcaaagcttaaatcagcaagcaagacaaaat
ctttttttagaagttcaagccgttttaaatgaaggtattgagtatggcggaacgagtatc
tcggattatcgtcatgcagatggtaagacaggcacgatgcagttacgcttaaatgtatat
aaacaacagcaatgtaaaaaatgtggacataaaatagaacagcaagtgattgctacacgt
aatagtcatttttgtccggtttgtcaaaaataa

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