KEGG   Shewanella loihica: Shew_0011
Entry
Shew_0011         CDS       T00489                                 
Name
(GenBank) DNA-3-methyladenine glycosylase I
  KO
K01246  DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
Organism
slo  Shewanella loihica
Pathway
slo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:slo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Shew_0011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slo03400]
    Shew_0011
Enzymes [BR:slo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.20  DNA-3-methyladenine glycosylase I
     Shew_0011
DNA repair and recombination proteins [BR:slo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Shew_0011
SSDB
Motif
Pfam: Adenine_glyco
Other DBs
NCBI-ProteinID: ABO21884
UniProt: A3Q8T6
Position
12604..13173
AA seq 189 aa
MDVKRCGWVGEDPLYKAYHDEVWGRPVYDSRELFAKLCLDGQQAGLSWITILKKQQNYES
AFADFDPYVIAKFDEAKVEELLQNPGIIRNRLKVNSIIKNAKGYIAFVEQGNDFSEFLWS
FVGGQPKLNHFQRLDQLPAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHTAD
CFCYQDKSN
NT seq 570 nt   +upstreamnt  +downstreamnt
atggatgtaaagcgttgtggctgggtcggcgaggatccgctatataaggcgtatcatgac
gaggtttggggacgtcccgtgtatgacagtcgggagctgtttgccaagctctgtctcgac
gggcaacaggcgggtctatcctggattaccatactcaagaagcagcaaaattatgagtcg
gcctttgccgattttgacccctatgtcatagccaagttcgatgaggcaaaggtagaggaa
ttactacaaaatcccggcatcattcgtaacaggctcaaggtcaattccatcatcaagaat
gccaagggttacatcgccttcgtggagcagggcaacgacttctccgagtttctctggagt
tttgtcggcggtcagcccaagctgaatcattttcaacggctggatcagctgccggcacag
acacccgagtcggaagccatgtcaaaggcattgaaaaagcttggttttaattttgtcggc
ccgactatctgctatgccttcatgcaggcggtaggtatggtcaacgaccacaccgccgac
tgtttctgttaccaagataagtctaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system