KEGG   Shewanella loihica: Shew_0019Help
Entry
Shew_0019         CDS       T00489                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8)
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
slo  Shewanella loihica
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Class
Metabolism; Overview; Carbon metabolism [PATH:slo01200]
Metabolism; Overview; Fatty acid metabolism [PATH:slo01212]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:slo00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:slo00650]
Metabolism; Lipid metabolism; Fatty acid degradation [PATH:slo00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:slo01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:slo00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:slo00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:slo00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:slo00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:slo00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:slo00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:slo00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(21039..23189)
Genome map
AA seq 716 aa AA seqDB search
MIYQSPTIQVELLEDNIARLCFNAEGSVNKFDRETLNSLNDALDALAQTQGVKGLMLTSG
KDAFIVGADITEFLGLFAQDDNVLQGWLEDANKVFNKLEDLPFPTISAIKGFALGGGCET
ILATDLRIADTSARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEAALK
VGAIDAVVAPELLETAACQMLQDAISEKIDWQARRQRKLSPLTLPKLEAMMSFATAKGMV
FKVAGKHYPAPMAVVEVIEKAALSERAEALQVEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAAKQAQAVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDINQAALDLGLNEAAKLL
TAQINRGRSTPAKMAGVLNNITATLDYNALKQADVVVEAVVEHPKVKATVLAEVEQVVGE
DAIITSNTSTISINLLAKSLQKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETVASVVAY
AAKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLEDGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDVMFEADRFGQKNGKGFYQYSVDRRGKP
KKEVDPLSYELLGNAFGEQKEFSSDEIIARTMIPMIIETVRCLEEGIIATPAEADMGLVY
GLGFPPFRGGVFRYLDTLGVANFVALADQYAHLGGLYQVTDKMRELAATNGSYYPA
NT seq 2151 nt NT seq  +upstreamnt  +downstreamnt
atgatctaccaaagtcctacgattcaagtggaattacttgaagacaatatcgctcggctc
tgttttaacgccgagggctcagtcaataagtttgatcgagagaccctcaactcccttaac
gacgcactcgatgccctagcacaaacccaaggggttaagggcctgatgctcacctcgggc
aaagatgcctttatcgtaggcgccgatatcacagaattcctgggactttttgcacaagac
gacaacgtgctacagggctggctggaagacgccaacaaggtgttcaacaagctcgaagat
ctgcccttcccaactatctcagccatcaaaggcttcgccctgggcggcggctgcgaaact
atcctagccactgacttacgtatcgccgatacctcggcgcgtatcggcctgccagagact
aagctgggcatcatcccaggctttggtggtacagtgcgtctgcctcgcgtgataggtgcc
gacaacgcacttgagtggatcaccacaggtaaagatcaacgcccggaagccgccctcaag
gttggcgccatcgacgccgtagttgctccagaattgctggaaacggcggcgtgccagatg
ctgcaagatgccatcagcgagaaaattgactggcaagcccgtcgtcagcgcaaactgtcg
ccgctgaccctgcctaagttggaagccatgatgtcatttgccaccgccaagggcatggta
ttcaaggttgccggtaaacactatcctgcgccaatggctgttgtcgaggtgatcgagaaa
gccgccttgagcgagcgcgccgaggcactacaggtagaacatcaagccttcatcaagctg
gccaagacagacgtggccaaggcacttatcggtatcttccttaacgaccaactagttaaa
ggcaaggccaagaaggcagccaaacaggcacaggcggttaactccgccgccgtgctgggc
gcaggcatcatgggtggcggtatcgcctaccagagcgcaagcaagggcacgcctatcgtg
atgaaagatatcaatcaggcggcactggatcttggcctcaacgaggcagccaagctgctc
acggcgcagatcaatcgtggtcgctctacaccagccaagatggcgggcgtgctcaacaac
atcacggcaaccctagactacaacgcacttaagcaagccgatgtcgttgtcgaagcagtg
gtcgagcatcctaaggtgaaggcgaccgtactggcggaagtcgagcaggtcgtgggcgaa
gatgccatcatcacctctaacacctccaccatctcaatcaatctgctggccaagagcctg
cagaaacctgagcgcttctgtggcatgcacttcttcaacccggtacacaagatgccactg
gttgaggtgatccgcggcgagcatagctcagaagagacagttgcctctgtcgtggcttac
gccgccaagatgggcaagacgcccatcgtggtcaacgactgcccaggcttcttcgttaac
cgtgtgctcttcccctacttcgccggtttcagcggcctgctagaagatggcgccgacttt
gctgccatcgacaaggtgatggagaagcaattcggttggcctatgggccccgcctaccta
cttgacgtagttggtctggacacgggtcatcacgcccaggccgttatggccgaaggcttc
cctgacagaatggctaaagaaggcaaagacgccatcgacgtcatgttcgaagccgatcgt
ttcggtcagaagaatggcaaaggcttctaccaatattcggtggatcgtcgtggcaagcct
aagaaagaggtcgacccactcagctatgaactactgggcaacgccttcggtgagcagaag
gagttcagcagtgacgagatcatcgcccgcaccatgatccctatgatcatcgaaacggtt
cgttgtctggaagaaggcatcatagccacgccggccgaagccgatatgggactcgtttat
ggactcggtttccctccattcagaggaggtgtgttccgctacctagacaccttaggtgtc
gctaacttcgtcgcccttgccgatcagtacgcccacctgggtggcctgtatcaggtaacc
gacaagatgcgtgaactggctgccaccaacggcagttactacccagcctaa

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