KEGG T00489: Shew

Shewanella loihica: Shew_0867

Entry

Shew_0867 CDS T00489

Definition

malate dehydrogenase (EC:1.1.1.37)

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

slo Shewanella loihica

Pathway

slo00020	Citrate cycle (TCA cycle)
slo00620	Pyruvate metabolism
slo00630	Glyoxylate and dicarboxylate metabolism
slo00680	Methane metabolism
slo01100	Metabolic pathways
slo01110	Biosynthesis of secondary metabolites
slo01120	Microbial metabolism in diverse environments

Module

slo_M00009	Citrate cycle (TCA cycle, Krebs cycle)
slo_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
slo_M00012	Glyoxylate cycle
slo_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:slo00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:slo00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:slo00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:slo00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C Semialdhyde_dh NAD_binding_10

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

988255..989190

AA seq 311 aa
MKVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFAG
EDPTPALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLVEKCAATCPKALIGIITNP
VNTTVAIAAEVLKAAGVYDKNRLFGVTTLDVIRSETFVAEAKGLNVADVKVNVIGGHSGV
TILPLLSQIEGVSFSDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVR
GLQGEANVVECAYVDGGSEHADFFAQPVLLGKNGIEQVLAYGEVSEFEANARDAMLDTLK
ADITLGVDFVK

NT seq 936 nt +upstreamnt +downstreamnt
atgaaagttgctgtacttggtgccgccggtggtattggccaggctcttgccctactactc
aaaactcaactgcctgccggttcaaaactatccctttatgatatcgcgccagtcactcct
ggtgttgccgttgacctaagccacatcccgactgctgtagaagttaagggttttgcgggt
gaagatccaacgccagcgctggaaggtgccgacgtggtactgatctctgccggtgttgca
cgtaagccaggcatggatcgttcagatctattcaacatcaacgcgggtatcgtaagaaac
ctggttgagaagtgtgccgcaacttgccctaaggcgctgatcggtatcatcactaaccca
gttaacactactgtcgctattgctgctgaagtactgaaagctgccggtgtatatgacaag
aaccgtctgttcggtgtgacaacccttgacgttatccgctctgaaactttcgttgctgaa
gcgaaaggtctgaacgttgccgacgttaaagtgaatgttatcggtggacacagcggcgtg
actattctgccactactgtctcaaatcgaaggcgtaagcttctctgatgaagaagtggct
gcactgacgactcgtatccagaacgcgggtaccgaagtggttgaagctaaggcgggtggc
ggtagcgcgactctgtctatgggtcaggcggcatgtcgtttcggtttgtcactggttcgc
ggcctacaaggcgaagctaacgttgttgagtgtgcctatgtcgatggtggcagcgagcat
gctgacttcttcgcgcaacctgtgctgctgggtaagaacggtatcgagcaggtacttgcc
tatggtgaggttagcgagttcgaagccaacgcacgtgatgctatgctagatacgcttaaa
gccgatatcacactgggtgtcgacttcgtaaaataa

All links

Pathway (11)   
   KEGG PATHWAY (7)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SLO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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