KEGG   Shewanella loihica: Shew_1566
Entry
Shew_1566         CDS       T00489                                 
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit clpA
  KO
K03694  ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
slo  Shewanella loihica
Brite
KEGG Orthology (KO) [BR:slo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:slo03110]
    Shew_1566
Chaperones and folding catalysts [BR:slo03110]
 Heat shock proteins
  HSP100
   Shew_1566
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 Clp_N AAA_16 Sigma54_activat AAA_22 AAA_7 TniB ResIII AAA_14 Mg_chelatase AAA_3 nSTAND3 AAA_25 AAA_6 IstB_IS21 TIP49 NACHT bpMoxR
Other DBs
NCBI-ProteinID: ABO23433
UniProt: A3QD85
Position
1796531..1798789
AA seq 752 aa
MLNKDLEVTLNLAFQQARDARHEYMTVEHLLLALIDNPAAQEALLACGANLDKLREEVSS
FIEQTTPIISDPNDDRETQPTLGFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA
VYLLRNGEITRLDVVNYISHGVSRDELDNAQEPEQIEDHSESEERSKLSQFTANLNEEAR
KGNIDPLIGRSDEIERSIQILCRRRKNNPLLVGEAGVGKTAIAEGLAYRIVNDEVPEVMA
DATVYSLDLGALLAGTKYRGDFEKRFKSLLKELSQDKHAILFIDEIHTIIGAGAASGGVM
DASNLLKPLLSSGHLRCMGSTTFQEYQSIFEKDRALARRFQKVDINEPSVAETTKILQGL
KSKYEEHHGVRYTMAALSVAARLADKHINDRHLPDKAIDVIDEAGARMAMQPASKRKKTI
GQAEIESIIAKIARIPEKTVSATDKDMLKNLERNLKMVVFGQDKAIEALSSAIRLSRSGL
SGAHKPVGSFLFAGPTGVGKTEVTSQLASCLSLKLVRFDMSEYMESHTVSRLIGAPPGYV
GYDQGGLLTDAVIKNPHCVVLLDEIEKAHPDVYNLLLQVMDHGTLTDNNGRKADFRHVTL
VMTTNAGVQETVRKSIGFKQQDHSQDALSEINRVFSPEFRNRLDEIIWFNHLDMTVIAKV
VDKFLVELQAQLDEKSVVLDVSDDARTLLAEKGYDKAMGARPMARVVTEMIKRPLADEIL
FGKLEKGGVAHVDVDGDKLTIKIEQSERLTQA
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgttaaataaagatttagaggtcaccttgaatctggcgttccaacaagccagagacgcg
cgacacgaatacatgaccgtagagcatctgctattggcgttaatcgataatcctgcggct
caagaggcgctgctcgcctgcggtgcaaacctcgataagttaagagaagaggtgtcgagt
ttcatcgaacagaccacacctatcatcagcgatcccaacgacgacagagaaacccagcct
accttaggttttcagcgcgtgctgcagcgcgccgtctttcatgtgcaatcctcggggcgt
aacgaggtgactggtgccaacgtcttagtggccatcttcagcgagcaggagtctcaggcg
gtttacctgctccgtaacggtgagatcacccgtctggatgtggtcaactacatctcccac
ggcgtgtcacgtgatgagctggataatgctcaggaacccgagcagattgaagatcacagt
gaatcggaagagcgcagcaagctgtcgcaatttaccgctaacctcaacgaagaggcccgc
aaaggaaatatcgatcccctgatcggccgctccgatgagatagagcgctcgattcagatc
ctctgccgtcgccgcaagaataatccactattggtgggtgaggctggcgtcggtaagacg
gcgattgccgaggggcttgcctatcgcatcgtcaacgacgaggttcctgaggtgatggct
gatgccactgtctactcgctggatctcggcgccttgctggccggtaccaaatatcgtggt
gactttgagaaacgctttaagagcctgctcaaggagctctcgcaagataagcacgccata
ctgtttatcgacgagatccacaccattatcggcgcaggcgcggcatctggtggcgtgatg
gatgcgtctaacttgctaaagccgctgctctctagtggccatcttcgctgtatgggttcg
accaccttccaggagtatcagagcatcttcgagaaagatcgtgccctggccagacgtttc
cagaaggtggatatcaacgagccttcggtggcggaaaccactaagatcctacaaggtctc
aagagcaagtatgaggagcaccatggcgtgcgctataccatggcggccttgtcggtggcg
gcccgtctggcggataagcatatcaacgacagacatcttcccgataaggcgatcgatgtg
atcgacgaggcgggcgcccgcatggcgatgcagccagcgagcaagcgcaagaagaccata
ggtcaggcggagatcgagtctatcatagctaagatagcgcggatccctgagaagacggta
tcggccaccgataaggatatgctgaagaaccttgagcgtaatcttaagatggtggtgttt
ggccaggataaggctattgaagccttaagctcggcgattcgcctgtcacgctctggcctc
agcggcgcccacaagccagtgggtagcttcctgtttgccggtccgaccggtgtgggtaag
acggaggtcaccagtcagctggcgtcctgtctcagcctcaagctggtgcgtttcgatatg
tccgagtatatggagagtcataccgtgtctcgccttatcggtgcgccgccgggctatgtt
ggctacgatcaggggggcttgttaaccgatgcggtgatcaagaacccacattgcgtggtg
ctgctcgatgagatcgaaaaggcccatcctgatgtctacaacctgctgctgcaggtgatg
gaccacggtaccttgaccgacaacaatggtcgcaaggcggactttagacacgtgaccctg
gtgatgacgaccaacgcgggcgtgcaggagacggtgcgtaaatccatcggcttcaagcag
caagatcacagccaggacgctttgtctgagatcaaccgcgtcttctcgcccgagttcaga
aaccgcttggatgagatcatctggttcaaccatctggatatgacggtcatcgccaaggtg
gtcgacaagttcctggtcgagctgcaggcgcaactggatgagaaatctgtggtgctggat
gtgagcgatgatgccagaaccttactggctgagaagggctatgataaggcgatgggggca
cggcctatggcccgtgtggtcaccgagatgatcaaacgaccacttgccgatgagatcctc
tttggcaagctggagaagggcggtgtggcccatgtggatgtcgacggtgataagctgacc
atcaagatcgaacagtcggagcggctgacacaggcgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (29)   

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