KEGG T00489: Shew

Shewanella loihica: Shew_1655

Entry

Shew_1655 CDS T00489

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

slo Shewanella loihica

Pathway

slo00020	Citrate cycle (TCA cycle)
slo00310	Lysine degradation
slo00380	Tryptophan metabolism
slo01100	Metabolic pathways
slo01110	Biosynthesis of secondary metabolites
slo01120	Microbial metabolism in diverse environments

Module

slo_M00009	Citrate cycle (TCA cycle, Krebs cycle)
slo_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:slo00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:slo00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:slo00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1902267..1905089

AA seq 940 aa
MHQGIMKAWLESSHLNGANSTYVEEMYEAYQEDPQSVSEDWRAVFDNLPYANGATADVPE
AAHSKVREYFRSLALDGRHKSAARVTDPEVDAKQVKVLQLINAYRFRGHQNANLDPLGLW
KRDTVSELDPAFHGLTGEDMEREFNTGSFAHGGDTMKLGDLVKALKATYCAAIGAEYMHI
TDTDEKRWIQQRLEPSLGRANYDKNTKTRILEGLNAAEGMEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRGGEAGTKEIVVGMAHRGRLNLLVNILGKKPSELFDEFAGKHSDELNGS
GDVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVMGSVRARLDRRGCKTGLQVMPI
TVHGDSAIAGQGIVQETFNMSQTRAFKVGGSIRIVVNNQVGFTTNLTEDTRSTEYCTDIA
KMVQAPIFHVNADDPESVAFVAQLAVDYRNEFKRDVVIDLVCYRRHGHNEADEPSATQPL
MYAKIKKHPTPRKIYADRLIEEQTLGADDVTAMINDYRDALDKGDCVVKEWRPMTLHTVD
WTPYLNREWDEAYPAELPLDRVKALADKISYVPESHKLQSRVAKIYKDRVAMAAGDKLLD
WGFAETLAYASILDDNKRVRITGQDSGRGTFFHRHAVLHNQNDATAYLPLRHLSDMQGPI
DISDSVLSEASVLAFEYGYATAEPGGLTIWEAQFGDFANCAQVVIDQFLSSGEQKWGRLC
GLTMLLPHGYEGQGPEHSSARLERFLQLCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRP
LVVMSPKSLLRHPLAVSSLEELAEGTFQNVIAEIDELDSSKVDRVVFCSGKVYFELLEKR
RKENLDNVALIRVEQLYPFPHEDMAQILAQYQHVKDFVWCQEEPQNQGAWYCSQHHFWAA
IPAGAQLTYAGREASAAPACGYPALHTQQQESLINSALKL

NT seq 2823 nt +upstreamnt +downstreamnt
atgcaccaaggcatcatgaaagcctggctcgaatcgtctcatttaaacggggctaattcg
acctatgtagaagagatgtatgaagcctatcaagaggaccctcagtcagtatcagaagac
tggcgagcggtgtttgataacctcccatatgccaacggtgcaacagcagatgtgcccgaa
gctgcccactctaaagtacgtgaatatttccgtagtttggcgctagacggtcgtcacaag
agcgctgctcgtgtgacagatccagaagtcgatgccaaacaggttaaagttcttcagttg
atcaacgcctaccgtttccgcggccaccagaatgcgaatctggatcccctcgggctatgg
aagcgcgataccgtctctgaattggacccggccttccacggcttaaccggcgaagatatg
gagcgtgaattcaacactggttcatttgctcacggtggcgacaccatgaagctgggtgat
ctggttaaagcactgaaagcaacctattgtgctgctatcggcgcggaatacatgcacatc
acagataccgatgagaagcgttggatccaacaacgcttggagccgtcattaggtagagcg
aattacgataaaaacaccaagacacgtatcctcgagggcctgaacgccgccgaaggtatg
gagaaatatctcggcgccaagttccccggcgcaaaacgtttctcactggaaggtggtgac
gcgctcgtccctatgatgcgtgaaatcatctaccgtggcggtgaagcgggtactaaagag
atcgtcgtgggcatggctcaccgtggtcgtctaaacctgctggttaacatcttaggtaag
aagccatcagaactcttcgacgagttcgccggtaagcacagcgatgagctcaacggttcg
ggtgacgttaagtatcaccaaggtttctcatcagatttcgaaacaccgggcggcaacgtg
cacctggcactggcgtttaacccgtcgcaccttgagatcgttaaccctgtggtcatgggc
tcggtaagagcacgtctggaccgccgcggttgtaagacgggtcttcaggtgatgcctatt
actgttcatggtgacagcgccatcgcaggtcagggcatagtacaagagacattcaacatg
tctcagacccgagccttcaaggtgggcggcagtatccgtattgtggtcaacaaccaggtg
ggctttactaccaacctgactgaagatacccgttcaaccgagtactgtaccgatatcgcc
aagatggtacaggcgcctatcttccacgtgaacgcagacgacccagaatcggttgccttc
gttgctcagctggcggttgattatcgtaacgagtttaagcgtgacgtagtgatcgatctg
gtctgttaccgtcgtcacggccacaatgaggccgacgagccgagtgcaactcagccgctg
atgtatgccaagatcaagaaacatccaacgccacgtaagatctatgccgaccgtctgatc
gaagagcagaccctaggtgcagatgatgtgaccgcgatgatcaacgactaccgcgacgcg
ctagataaaggcgattgcgtagttaaagagtggcgtccaatgacgctgcacacggttgac
tggacaccttatcttaaccgcgagtgggacgaggcttatcctgccgagttgccgctagat
cgcgttaaggcgttggctgataagatcagctacgtgccagagagccacaagctacagtcg
cgtgttgctaagatctacaaagaccgtgtggccatggccgccggtgacaagctgctggac
tggggctttgccgagacactagcctacgcctcgattttggatgacaacaagcgcgtgcgt
atcacaggtcaagactctggccgtggtaccttcttccaccgtcacgccgtgctgcacaac
caaaatgatgcgacagcttatctgccgctgcgtcacctgtctgacatgcaaggccctatc
gatatctctgactcggtattgtctgaagcctcagtattggcgttcgaatatggttatgcc
acggctgagccgggcggcctgaccatttgggaagcccagttcggtgacttcgctaactgt
gcccaggtagtgatcgatcagttcctctcttctggcgagcagaagtggggccgtctgtgt
ggtttgaccatgctgttgccacatggctacgaaggtcagggcccagagcactcgagtgca
cgtctggagcgtttcctgcagctgtgtgctaaccacaacatgcaggtgtgtgtcccatcg
acaccggcacaggtttaccacatgctacgccgtcaggtagtgcgtcctatgcgtcgtcct
ctggtggtgatgtcacctaagtcactgctgcgtcatccgctggcggtgtctagcctggaa
gagctggccgaaggcaccttccagaatgtgatagccgagattgacgagctcgatagcagc
aaggtcgatcgcgtggtcttctgtagcggtaaggtttacttcgaactgctcgagaagcgt
cgtaaagagaacctggacaacgttgctctgatccgtgtagaacaactgtacccgttccca
cacgaagatatggcacagatcctcgcccagtatcagcacgttaaagatttcgtttggtgt
caggaagaacctcagaaccagggcgcttggtattgcagccagcaccacttctgggccgcc
attcctgccggagctcaattaacctatgcgggtcgtgaagcctcggccgcgccagcatgt
ggttatccggccctgcacacccagcagcaagaatctttaatcaatagcgcattaaaactg
tag

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SLO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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