KEGG   Shewanella loihica: Shew_1954
Entry
Shew_1954         CDS       T00489                                 
Name
(GenBank) SSU ribosomal protein S1P
  KO
K02945  small subunit ribosomal protein S1
Organism
slo  Shewanella loihica
Pathway
slo03010  Ribosome
Brite
KEGG Orthology (KO) [BR:slo00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Shew_1954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:slo03011]
    Shew_1954
Ribosome [BR:slo03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    Shew_1954
  Bacteria
    Shew_1954
SSDB
Motif
Pfam: S1 Spt6_S1 PCB_OB
Other DBs
NCBI-ProteinID: ABO23820
UniProt: A3QEC2
Position
2259598..2261265
AA seq 555 aa
MTESFADLFEQSLQQLEFRPGSIVRGTVVSIQNGMVLVDAGLKSESPIPADQFKNAQGVL
EIAVGDEVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGVINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSA
ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTKLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKTNPWDDFAER
YAKGDKVTGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEEAVSDYKKGDEISAVVL
SVDPERERISLGVKQTEDDPFNAYLADKKKGAIVTGTVTAVDAKGVTIELAETVEGYLRV
SDISRERIEDASTVYSVGDTVESKFMGVDRKNRSISLSIRAKDEADEKEAMANLNKQDDV
AMSNAMAEAFKAARK
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgactgaatcttttgctgatctatttgaacaatcccttcaacaacttgagttccgtcca
ggttctatcgttcgtggtactgtagtatcaatccagaacggtatggtactggttgacgct
ggccttaagtctgaaagcccaatcccagctgaccaattcaaaaacgcacaaggcgttcta
gaaatcgctgttggtgatgaagttgacgtagcccttgactctgttgaagatggtttcggt
gaaactcaactttctcgtgagaaagctaagcgccacgaagcttggatcgttctagaaaaa
gcttacgaagatgctgaaactgtaatcggtgtcatcaatggtaaggttaaaggcggtttc
accgttgaactaaacggtatccgtgcattcctaccaggttctctagttgacgttcgccca
gttcgcgacactgctcacctagaaaacaaagaactagaattcaaggttatcaagctagac
cagaagcgtaacaacgttgttgtttctcgtcgtgctgttatcgaatctgaaagcagtgca
gagcgtgatgcgctacttgaaaacctacaagaaggtcaagcagttaagggtatcgttaag
aacctgactgactacggtgcattcgttgacctaggtggcgttgacggtcttctacatatc
acagatatggcttggaagcgcgttaagcacccatctgaaatcgtaaacgttggtgacgaa
atcaacgttaaagtacttaagtacgatcgtgagcgcactcgtgtttcactaggtcttaag
caacttggcgaagacccatggttagaaatcagcaagcgctacccagaaaacactaagttg
actggtcgcgtaactaacctaactgactacggctgcttcgttgaaatcgaagaaggcgtt
gaaggtctggtacacgtttctgaaatggattggactaacaagaacatccacccatctaag
gttgttaacctaggtgatgaagttgaagttctagttctggacatcgatgaagagcgtcgt
cgtatttctctaggtctgaagcaatgtaagactaacccatgggatgatttcgcagagcgt
tacgcgaaaggcgacaaggttactggtaagatcaagtctatcactgacttcggtatcttc
atcggtctagacggcggcatcgacggtctggttcacctgtctgacatctcttggaacggt
actggcgaagaagctgtatctgactacaagaaaggcgacgaaatcagcgcagttgtactg
tcagttgacccagagcgtgagcgtatcagcctaggtgttaagcagactgaagacgatcca
ttcaacgcttatcttgcagataagaagaaaggtgctatcgtaactggtactgttactgca
gtagacgcgaaaggcgttactatcgagttggctgaaactgtagaaggttacctacgtgtt
tctgacatctctcgtgagcgcatcgaagatgcatctactgtatactcagtaggtgacact
gttgaatctaagttcatgggtgttgatcgcaagaaccgttctatcagcctgtctatccgc
gcgaaagacgaagctgatgagaaggaagcgatggctaacttgaacaagcaagatgacgtt
gctatgagcaatgccatggctgaagcgttcaaagcggctcgcaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system