KEGG T00489: Shew

Shewanella loihica: Shew_2255

Entry

Shew_2255 CDS T00489

Definition

tryptophan synthase subunit beta (EC:4.2.1.20)

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

slo Shewanella loihica

Pathway

slo00260	Glycine, serine and threonine metabolism
slo00400	Phenylalanine, tyrosine and tryptophan biosynthesis
slo01100	Metabolic pathways
slo01110	Biosynthesis of secondary metabolites
slo01230	Biosynthesis of amino acids

Module

slo_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:slo00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:slo00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2634863..2636074

AA seq 403 aa
MMTKLDPYFGEYGGMFVPQILMPALKQLEAAFVDAQNDPSFQAEFTDLLKNYAGRPTALT
LTRNLSPNPLVKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATA
LACALLGLKCKVYMGAKDVERQSPNVFRMRLMGAEVIPVTSGSATLKDACNEAMRDWSAS
YDKAHYLLGTAAGPHPFPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGM
FADFIDEPSVKLIGVEPAGLGIDTPKHGAPLKHGKTGIFFGMKAPLMQDKEGQIEESYSI
SAGLDFPSVGPQHAHLAATGRATYESATDDEALAAFQLLARSEGIIPALESAHALAYAIK
LAEAATEETLLVVNLSGRGDKDIFTVADILEKQQANNEESGNE

NT seq 1212 nt +upstreamnt +downstreamnt
atgatgactaagctggacccttatttcggcgaatatggcggtatgtttgtaccgcagatt
ttgatgcccgccctcaagcagctcgaagccgccttcgtcgatgcgcagaacgatccgagc
tttcaagccgaatttaccgatctgctgaaaaactacgccggcagaccgaccgccttgacg
ttgacccgtaaccttagccctaaccctctggtgaagatctacctcaagcgtgaagatctg
ctccatggtggcgcccataagaccaaccaggtattgggtcaggccctgctggccaagcgt
atgggcaagaaagagatcatcgccgaaaccggcgccggacagcacggcgtcgccacggcc
ctggcctgcgcactattaggcctcaagtgtaaggtctacatgggcgccaaagatgtcgag
cgtcaatcgcccaacgtgttccgtatgcgcctgatgggcgccgaggtgatcccggtcacc
tcaggctcagccaccttgaaagatgcctgtaacgaggcgatgcgcgactggtctgccagt
tatgacaaggctcactacctgctaggcaccgccgccggtccacatcccttccccaccata
gtgcgcgaattccagcgcatgattggcgaagagaccaaggcgcagatcctagagcgtgag
ggtcgtctgcccgacgcggtgatcgcctgtgttggcggcggttcaaatgccatcggtatg
tttgccgactttatcgacgagccttcggtaaagcttatcggtgtcgagcccgcaggactc
ggcatagatacccctaaacatggcgcgccgctcaagcacggcaagacggggatcttcttc
ggcatgaaggcgccgctaatgcaagataaagagggccaaattgaggagtcttactccatc
tcggcaggcttggacttcccgtcagtggggccacagcacgcccatctggcggcgaccggt
cgcgccacctatgagtcggccacagatgacgaggccttagcggccttccagctgctggcc
cgcagcgaggggatcatcccggcactggagtcggcccatgccctagcctatgccatcaag
ctggccgaggccgctaccgaggagacgctattggtggtcaacctctcaggccgcggcgac
aaggatatcttcaccgtcgccgacatcttagaaaaacaacaagcaaacaacgaggagagc
ggcaatgagtaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SLO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

Download RDF

DBGET integrated database retrieval system