KEGG   Shewanella loihica: Shew_2256Help
Entry
Shew_2256         CDS       T00489                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha (EC:4.2.1.20)
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
slo  Shewanella loihica
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Class
Metabolism; Overview; Biosynthesis of amino acids [PATH:slo01230]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:slo00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:slo00400]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
2636067..2636870
Genome map
AA seq 267 aa AA seqDB search
MSNRYQAAFAALNASGRGAFVPFVTIGDPNRELSLKIIETLVENGADALELGFPFSDPLA
DGPVIQGANLRALAAGTTPGGCFEIITAVRAKYPELPIGLLLYANLVYANGVEAFYAKAK
AAGVDSVLIADVPVEEAAPFIAAAKAHEVAPIFIAPPNGDAETLRQVAEQGQGYTYLLSR
AGVTGTESKAGMPLDDILAQLKAFDAPPPLLGFGIAEPDQVKAAIDSGAAGAISGSAVVK
IIETHQDDEQALLSALGQFTREMKAAT
NT seq 804 nt NT seq  +upstreamnt  +downstreamnt
atgagtaaccgttatcaggcagcatttgccgcacttaacgcaagcgggcgtggcgccttc
gtgcctttcgtcaccataggcgatcccaacagagaattgtcgctgaagatcatcgagacc
ttagtagaaaacggcgccgatgccttggagctgggctttcccttctccgatcccctcgcc
gacggcccggtgatccagggcgctaacctgcgcgccttagccgcgggcactacgccgggt
ggctgtttcgagatcatcactgcggtgcgcgccaaatacccagagctgcccatcggcttg
ctgctgtacgccaacctagtgtatgccaacggcgtcgaagccttctacgccaaggccaag
gccgccggcgtggattctgtgcttatcgccgacgtgccagtggaagaggcagcgcccttt
atcgccgcagccaaggcccacgaggtagcgcctatctttatcgcgccgcccaatggcgat
gccgagacactgcgccaggtcgccgagcagggccagggctacacctacctactatcacgc
gccggcgtcacgggcacagagtcgaaggcaggcatgccgctggatgatatcctggcccag
ctcaaggccttcgacgcgccgccgcccctactgggctttggcatcgcagagccagatcag
gtcaaggccgccatcgactcgggcgcagcgggcgccatctcgggctctgccgtggtgaag
atcatcgagacccaccaagacgatgagcaggccctgctcagcgccctgggtcagtttacc
cgtgagatgaaggcggcaacctaa

DBGET integrated database retrieval system