KEGG   Shewanella loihica: Shew_2425Help
Entry
Shew_2425         CDS       T00489                                 

Gene name
fadJ
Definition
multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3)
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
slo  Shewanella loihica
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:slo00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Shew_2425 (fadJ)
   01212 Fatty acid metabolism
    Shew_2425 (fadJ)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Shew_2425 (fadJ)
   00650 Butanoate metabolism
    Shew_2425 (fadJ)
  Lipid metabolism
   00071 Fatty acid degradation
    Shew_2425 (fadJ)
   01040 Biosynthesis of unsaturated fatty acids
    Shew_2425 (fadJ)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Shew_2425 (fadJ)
   00310 Lysine degradation
    Shew_2425 (fadJ)
   00380 Tryptophan metabolism
    Shew_2425 (fadJ)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Shew_2425 (fadJ)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Shew_2425 (fadJ)
   00281 Geraniol degradation
    Shew_2425 (fadJ)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Shew_2425 (fadJ)
Enzymes [BR:slo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Shew_2425 (fadJ)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Shew_2425 (fadJ)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Shew_2425 (fadJ)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(2849329..2851449)
Genome map
AA seq 706 aa AA seqDB search
MDKSFTLNRLDNGIAVLTMDVPGETMNTLRAEFGPEICEMLAEIKADAGIRGVVIISGKK
DSFVAGADISMLDACATAEDARELSKQGHEVFFALESLSIPVVAAINGACLGGGLELALA
CHQRVCTDSNKTMLGLPEVQLGLLPGGGGTQRLPRLVGIAKSLDMMLTGKQLRAKQALKM
GLVDDVVPESILLQTAIEMALAGARPAKKPKLSTVEKLLEGTPVGRNIIFEQALKQVNKK
TQGNYPAPEKIIDCVRQGVTKGIVKGLEVEAQHFGDLVVSNESEALRSIFFATTEMKKES
GAGDVSPKAVNKVMVLGGGLMGGGIASVTTTKAKIPVRVKDISEIGLSNALAYAYKLLAK
GVKRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVFEDLNLKHQMVKDVERECGEHT
IFASNTSSLPIKQIAEAAERPENVIGLHYFSPVEKMPLVEVIAHDKTSPQTIATTVAFAR
KQGKTPIVVKDGAGFYVNRILALYMNEAANLLLEGQSVDHLDKALVKFGFPVGPMTLLDE
VGIDVGAKISPILEKELGERFKAPAAFDKLLADDRKGRKNGKGFYQYGAKSKKKLVDESV
YGVLGLTPGADGEPIALAERCVVQMLNEAVRCLEEGIIASPRDGDIGAIFGIGFPPFLGG
PFRYMDSLGAKHLVETLKRYQDQFGDRFAPCDRLVEMAESGSKFYE
NT seq 2121 nt NT seq  +upstreamnt  +downstreamnt
atggataagagttttacattaaatcgtctcgacaacggcattgccgtgctcaccatggat
gtgcctggcgagacaatgaatacccttagagccgagtttggccccgagatctgtgagatg
ttggccgagataaaggccgatgccgggattcgcggtgtggtgatcatctcgggtaagaag
gactccttcgtggcgggcgccgatatctctatgctggatgcctgcgctaccgccgaagat
gccagggagctgtctaagcagggccacgaagtgttttttgcgttggagtcgctctcgatt
cccgtggtagccgccatcaatggcgcctgtctcggtgggggattagaactggccctggcc
tgtcatcagcgcgtctgtaccgacagcaacaagacaatgttggggctgcccgaggtgcaa
cttggcctgctgccaggtggcggcgggactcagcgtctgccacgtttagtgggtattgcc
aagtcgctggatatgatgctcaccggtaagcagctgcgcgccaagcaggcgttgaagatg
gggctagttgacgatgtggtgccggaatcgattcttttgcagacggcgatagagatggcg
ctggccggagcgcgtccggcgaagaaaccaaagctgtcgacggtagagaagctgcttgag
ggcacgcctgttggtcgcaacatcatcttcgaacaggcgcttaagcaggtcaataagaag
actcagggtaactatcctgcgccggagaagatcatcgactgtgtgcgtcagggcgtgacc
aaaggcatagtgaaaggcctagaggttgaggcgcagcactttggcgacctcgtggtctcc
aatgagtcagaggccctgcgcagcatcttctttgcaaccactgagatgaagaaagagtct
ggtgccggtgatgtatcgccaaaggccgtcaacaaggtgatggtactgggcggtggcctg
atgggtggcggtatcgcctctgtgaccaccaccaaggcgaagatccctgtgcgggtgaaa
gatatcagcgagataggtttaagcaatgcactggcctatgcctataagttgctggccaaa
ggggtaaaacgtcgtcacatgacgcctgcggtgcgcgacaatctgatggcgctgatgacc
accaccacagagtataaagggatcaaggatgcagacatggtggtggaagctgtgtttgaa
gatttaaacctcaagcatcagatggtgaaggatgtcgagcgtgaatgtggcgagcatacg
atttttgcctctaacacctcatccttacccatcaagcagatcgccgaggccgccgagcgt
ccagagaatgtgattggcctgcactacttctcaccggtagagaagatgccactggtcgag
gtgatcgcccatgacaagacctcaccacagactatcgccactacagttgcctttgctcgc
aagcagggtaagacgcctatcgtggtgaaagatggtgccggtttctatgttaaccgtatt
ctggcgctctacatgaacgaggcggcgaatctgctgctggaaggtcagagtgtagatcat
ctagataaggcgctagtgaagtttggtttccccgttggtcctatgacgctgctcgatgag
gtcggcatagatgtgggcgccaagatctcgccgattctggagaaggagttgggtgagcgc
tttaaggcacccgccgcctttgacaagcttttggccgatgaccgtaaaggccgtaagaat
ggtaagggcttctatcaatatggcgctaagtcgaagaagaagctggtggatgagagcgtc
tatggtgtgcttgggttaacacctggcgccgacggcgagccaatagcgttggccgagcga
tgtgtggtgcagatgcttaatgaagcggttcgttgtctggaggaggggattattgcctcg
ccacgagacggtgatatcggcgctatatttggtatcggcttcccgccattcttgggtgga
cctttccgttacatggactccttgggtgccaagcacttagttgagaccttgaaacgttat
caagatcaattcggggatcgtttcgcgccatgtgatcgcctagtcgagatggccgaatcg
ggcagtaagttctacgaatag

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