KEGG   Shewanella loihica: Shew_2535Help
Entry
Shew_2535         CDS       T00489                                 

Definition
pyridoxal-dependent decarboxylase
Orthology
K01580  
glutamate decarboxylase [EC:4.1.1.15]
Organism
slo  Shewanella loihica
Pathway
Alanine, aspartate and glutamate metabolism
beta-Alanine metabolism
Taurine and hypotaurine metabolism
Butanoate metabolism
Metabolic pathways
Biosynthesis of secondary metabolites
Module
GABA (gamma-Aminobutyrate) shunt
Class
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:slo00650]
Metabolism; Amino acid metabolism; Alanine, aspartate and glutamate metabolism [PATH:slo00250]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:slo00410]
Metabolism; Metabolism of other amino acids; Taurine and hypotaurine metabolism [PATH:slo00430]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
2992865..2994505
Genome map
AA seq 546 aa AA seqDB search
MTSKQTRQATASEEALMRIFTLPEAPNSTLGKIEKNLSENLMGFLKESIVAVEKPLTEIE
KDFQAYQIPTAPSFVSDYAEQMMQTLIAHSVHTSAPSFIGHMTSALPYFVLPLSKMMVGL
NQNLVKIETSKAFTPLERQVLGMMHHMVYGQTEEFYQSWMHSASHSLGAFCSGGTVANIT
ALWIARNRLLKPDGDFKGVAQSGLMRALRHYGYDDLAILVSTRGHYSLGKAADLLGIGRD
NIISVPCASDNKVDVAKMREAAEQLAEQNIKVMAIVGVAGTTETGNIDPLDELANLAEQL
GCHFHVDAAWGGASLLSSKYRHLLAGIERADSVTIDAHKQMYVPMGAGMVLFKDPEFANA
IKHHAEYILRKGSKDLGSQTLEGSRPGMAMLVHACLQIIGRDGYEILINNSLEKARYFGE
LIAAQDDFQLVSRPELCLLTYRYVPAKVQAQLNEAVAAGDAARVSEINALLDGLTKFIQK
RQREQGKSFVSRTRIIPANNLEQTSVVFRVVLANPLTSNEILQQVLDEQRDIAKLDDRFL
PKLLAL
NT seq 1641 nt NT seq  +upstreamnt  +downstreamnt
atgacatcaaaacagacacgacaagcgaccgcctctgaagaggccttgatgcgtattttc
actctgcccgaggcaccgaattcgaccctgggtaagatagagaaaaacctgtcggaaaac
ctgatgggcttcctcaaagagagtatcgtcgcagtcgagaagccgctgaccgaaatagaa
aaagatttccaggcctaccagatccccacagcccccagcttcgtctccgactatgccgag
cagatgatgcagaccctgatcgcccacagcgtgcacacctcggctcccagcttcataggt
catatgacctcggccctgccctatttcgtgctgccactgtcgaagatgatggtgggactc
aaccaaaatctggtgaagatagagacctccaaggccttcacgccgctggagcgccaggtg
ctggggatgatgcaccacatggtctatggccagacagaagagttctaccagagctggatg
cacagcgccagtcactcattaggcgccttctgctccggcggcacggtcgccaacatcacg
gcgctgtggatcgcccgtaaccgtctgttaaagccggacggcgacttcaagggggtggcc
caatctggcctgatgcgagcactgcgccactacggctatgacgatctggccattctggta
tcaactcgaggtcactactccctcggcaaggccgcagatctgttaggcataggccgcgac
aacatcatcagcgtgccctgcgctagcgataacaaggtagatgtggccaagatgcgcgaa
gcggccgagcagttagccgagcagaacatcaaggtgatggcgattgtcggcgtggccggc
accacggagacaggtaatatcgacccgctcgatgagcttgcgaatctcgccgagcagctg
ggttgccacttccatgtggatgccgcctggggtggtgccagcctgctgtcgagcaagtat
cgccacctgttagccggcatagagcgcgccgactcagtcactatcgatgcccacaagcag
atgtacgtgcccatgggcgcaggtatggtgctatttaaagacccggaatttgccaacgcc
atcaaacaccacgccgaatatattctgcgtaagggctcgaaagatctgggtagccagacg
ctggaggggtcacgtcccggcatggccatgctggttcatgcctgcttacagatcatcggc
cgcgacggctatgagatcttaatcaacaacagcctggagaaggcgcgttacttcggcgag
ctgatcgccgctcaggacgattttcagctggtttccaggcctgagctctgcctgctgacc
taccgctatgtgccagccaaggtgcaggcgcagctcaatgaggcggtcgcagccggtgac
gcggcccgtgtgagcgagattaatgcattgcttgacggcctgacaaagtttatccagaag
cgccaacgtgagcagggaaaatccttcgtctcccgtacccgcatcattccagccaataac
ctggagcagacctctgtggtgttccgcgtggtactggccaaccctttgaccagtaatgag
atcttacagcaggtattggatgagcagcgcgacatcgccaagctagacgaccgcttcctg
cctaagctgctggccctatag

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