KEGG T00489: Shew

Shewanella loihica: Shew_3324

Entry

Shew_3324         CDS       T00489

Name

(GenBank) conserved hypothetical protein

K06969

23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]

Organism

slo Shewanella loihica

Brite

KEGG Orthology (KO) [BR:slo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slo03009]
    Shew_3324
Enzymes [BR:slo01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     Shew_3324
Ribosome biogenesis [BR:slo03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Shew_3324

SSDB

Motif

Pfam:

Methyltrans_SAM Cons_hypoth95 Methyltransf_31 PrmA Methyltransf_25 MTS Methyltransf_15 TRL

Other DBs

NCBI-ProteinID:

ABO25190

UniProt:

A3QI92

Position

3963773..3964834

AA seq 353 aa
MIRAHSSIPPIRDHKIMSNADLLRQAISQRTELLAAAQAANTNCFRVFHGTVEGIDGLTI
DRYGDAWLIQSFHQSLTQEELESLGQELKQTQDLPIIYNDRSNKNSRILNPLTPELDAFA
SAEQEMTENGIRFISKLRHEGQDPLLFLDMRIGREYVKANSQGKSVLNLFSYTCGIGTAA
AVGGAESVTNVDFSSFALAAGRRNAELNGVSDRCEFIQSDAFPAMRQLAGMKVGGRRNQK
LPSYPKLAPRQFDLVFLDPPRFAKSPFGTVDLINDYQSLFKPAMLATKAGGTIVCCNNVA
KVERQAWLDALIRCVEKQGRQVASFEWIHCHQDFPSFDGNHPLKIVALTLADQ

NT seq 1062 nt +upstreamnt +downstreamnt
atgatccgcgctcactccagcataccaccgattagggatcataagatcatgtcgaacgcc
gacctgctgcgccaggcgatcagccaaagaaccgagctactcgccgcggcacaagccgcc
aacacaaactgttttcgcgtgtttcacggcacggtcgaggggatagacggactcaccata
gatcgctatggcgacgcctggctgatccaatcgtttcaccagagcctgacccaagaggag
cttgaaagcctcggccaagagctcaagcaaactcaagatcttcccattatctacaatgat
agatccaataaaaactcgcgtattctcaacccgctgacgcctgaactcgacgccttcgcc
agcgccgagcaggagatgacggaaaatggcatccgcttcattagtaagttacgccacgaa
gggcaagatcccctgctgtttctcgacatgcgaatcggccgggaatatgtgaaggccaac
agccaaggcaaatctgtgctgaacctgttttcctacacctgcggcataggcacagccgct
gctgtcggcggtgcagaatcggtcaccaacgtcgacttctcctcctttgccctggccgcc
ggacgtcgcaacgccgaactcaatggggtaagcgacaggtgcgagtttattcagagcgat
gcctttcccgccatgcgccaactggcgggcatgaaggtaggcggacgtcgcaaccagaaa
ctccccagctatcctaagctggcgccgcgtcagttcgacctggtgtttctagacccgccg
cgtttcgccaagagccccttcggcactgtggatctgatcaacgactaccagagcctgttc
aaacccgccatgctggccaccaaggcaggcggcaccatagtctgctgcaacaacgtcgcc
aaggtagagcgtcaggcatggctcgatgccttgattcgctgcgtcgagaagcaagggcgg
caggtcgccagcttcgagtggatccactgccaccaggacttcccctccttcgacggcaat
catccgcttaagatagtggcgctcaccttggcagatcagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF

DBGET integrated database retrieval system