KEGG   Serratia liquefaciens: M495_03320
Entry
M495_03320        CDS       T02740                                 
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
slq  Serratia liquefaciens
Brite
KEGG Orthology (KO) [BR:slq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slq03009]
    M495_03320 (rumA)
Enzymes [BR:slq01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     M495_03320 (rumA)
Ribosome biogenesis [BR:slq03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    M495_03320 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM Methyltransf_25 PCMT Cons_hypoth95 RrnaAD MTS Met_10 Methyltransf_11 CMAS FtsJ DHDPS Methyltransf_23 Methyltransf_4 DOT1
Other DBs
NCBI-ProteinID: AGQ29504
Position
722220..723569
AA seq 449 aa
MAQFYSPKRRVTTRQNSPVLTLTVDNLDPFGQGVAHHNGKAIFVPGVLPGEQAEVQLTEE
KNKFAKGRLKRLLSRSPQRVEPRCPHFGVCGGCQQQHADESLQQQSKAAALVRMIARETG
VTPQQEPVIAGPQYGYRRRARLGLLWQPKQQRLVMGFRQAASSDLVPVTQCPVLHPELEQ
LLTPLRACLSALQVARRLGHVELVLADNGPVLVLRHLDALKEDDRQALQAFARTKNVTIY
LAPDSDSLEKLCGETPYYQVDGLRLDFSPRDFIQVNDHVNQQMVAQALEWLSIQPNDRVL
DLFCGMGNFTLPLARRAAAVVGIEGVATLVANGQYNAHKNRLNNASFFHENLEEDVEQQP
WAAQGFDKVMLDPARAGAAGVMSHIVKLAPERVVYVSCNPTTLARDSKVLLSAGYRLARV
RMLDMFPHTGHLESMALFINGSAPEVAAK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggcgcaattctactctccgaaacgtcgcgtgacgacccggcaaaattctcccgtgcta
acactgacggtagacaacctcgatcccttcggtcagggcgtggcgcaccacaacggcaaa
gcgattttcgtcccgggggtattaccgggcgagcaggcggaagtccaactcacggaagaa
aaaaacaagtttgccaaaggcaggttaaagcgcctgctcagccgcagcccgcaacgtgtc
gaaccgcgctgcccacactttggcgtgtgcggcggttgccagcagcaacacgcggatgaa
agcctgcagcagcagagcaaggcggcggccctggtgcgaatgatcgctcgcgagaccggc
gttacgccgcagcaggagccggtgatcgccggtccacaatacggctatcgccgtcgcgcc
cgtctcgggctgttgtggcagcccaaacagcagcgtctggtaatgggctttcgccaggcg
gcgtccagcgatctggtgccggtgacgcagtgcccggtgctgcatcctgaactggaacaa
ttactgacgccgttgcgagcctgcctgagcgcattgcaggtcgccagacgactcgggcat
gtcgaactggtgctggcagataacggcccggtactggttctgcgccatctcgacgccttg
aaagaggatgaccgccaggccttgcaggcttttgcgcggacaaaaaacgtaaccatttat
ttggcaccggacagcgatagcctcgaaaaactgtgcggtgaaacgccgtattatcaggtc
gacgggctacgcttagacttcagtccgcgtgactttattcaggtaaatgaccacgtaaat
cagcaaatggtggcccaggcccttgaatggctcagtattcaacccaatgatcgggtattg
gatctgttctgcggcatgggcaattttaccctgccgttggcgcgacgcgccgctgcggtg
gtaggcatagaaggtgttgccacactggtagcgaatgggcaatataatgcacataagaat
aggctgaataacgccagcttcttccatgaaaatctggaagaggacgttgagcaacaacct
tgggcagcacaaggatttgataaagtgatgctggaccctgcccgtgcgggcgcggccgga
gtgatgtcacatattgttaaactggcgccagagcgggtggtttatgtttcctgtaacccg
accacgctggcacgcgacagcaaagtgctgctgagcgccggttatcgtcttgcacgtgtg
cggatgttggatatgtttccgcatacggggcatcttgagtcaatggcgctgtttattaac
ggttctgcgccagaggtcgctgcaaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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