KEGG   Serratia liquefaciens: M495_24280Help
Entry
M495_24280        CDS       T02740                                 

Definition
5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
slq  Serratia liquefaciens
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:slq00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    M495_24280
Enzymes [BR:slq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     M495_24280
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     M495_24280
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(5121593..5122402)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILALSDQPVRSVQRRAKYLL
IELDHGWIIVHLGMSGSLRMLAEETEAGKHDHVDLVISNGMTLRYTDPRRFGAWLWCEDL
AASNVLAHLGPEPLSEAFNGAYLYEKSRNKRTLIKPWLMDNKLVVGVGNIYASESLFTAG
ILPGRPAGSLSKAEAELLAETIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRACGTPIESAKHGQRSTFFCRRCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgaaaccagccgacgcgggattgaaccttatcttgtcggt
cacagcattcaatatgcggtggtgcgtaatgcccgcctgcgctggccggtttccgagcaa
attctggcgctgagcgaccaaccggtgcgcagcgtgcaacgccgtgccaagtatctgctg
attgaactggaccacggttggattattgttcacctgggcatgtccggcagcctgcgcatg
ctggctgaggaaaccgaagccggcaagcacgaccacgtcgatctggtgatcagcaatggc
atgaccctgcgctataccgatccccgccgttttggcgcctggttatggtgcgaggatctg
gcggccagcaacgtgctggcgcacctggggccggaaccgctaagcgaagcctttaacggc
gcttacctgtacgaaaagtcacgcaacaagcgcacgctgatcaaaccctggttgatggat
aacaagttggtggtcggggtaggcaacatctacgccagtgaatcgctgtttaccgccggg
atcttaccaggccgtccagcgggctcgctgagcaaagcggaggcggagttattggcggag
accatcaaggcggtgttgctgcgttcaatcgaacaggggggcaccacgctgcgcgatttc
ctgcagtcagacggtaaaccgggttatttcgcgcaggagttgcaggtgtacggccgtgcg
ggggagccttgtcgcgcatgcggcacgccgattgagtctgccaaacacgggcagcgcagc
acatttttctgccgtcgctgccagcgctga

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