KEGG   Streptomyces lincolnensis: SLINC_2161
Entry
SLINC_2161        CDS       T04801                                 
Name
(GenBank) secreted pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
sls  Streptomyces lincolnensis
Pathway
sls00040  Pentose and glucuronate interconversions
sls01100  Metabolic pathways
sls02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sls00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    SLINC_2161
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SLINC_2161
Enzymes [BR:sls01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     SLINC_2161
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-ProteinID: ANS64385
UniProt: A0A1B1M6X3
Position
complement(2576400..2577668)
AA seq 422 aa
MLIGCTALVLGLTGTGAEAGSRDLGRQVLGANDGWGSEGAGTTGGSAADAEHVYTVTTWA
EFKAALAAGGTAPRIIKVKGMIDAVSEGCEAFVTGGYDLQQYLKDYDPAVYGNDKVAMGP
QEDARVASMANQNAQIKAFVPSNTTIVGVGKNSGILGGSLQIFGVSNVILRNLTIEAPLD
CFPKWDPTDDNNTGNWNSEYDTVVVYGTDHVWLDHNTFTDGRFPDSERPVYFGKVFQQHD
GLTDIVRGSNHVTVSWNRYENHDKNMLIGNGDGLAAIDAGKLKVTMHHNRFDGILQRSPR
VRFGQVDVYNNHYVVNEEQQDDYYIFGVGISSQLHATDNAISLPPGASVGKALKKWSEAP
LTAENNYVNGRRTDLIAVHNAEIPSETLQSGAGWKPTLRTKVDHPKAVPGIVAYRAGAGH
LR
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtgctgatcggctgcaccgcgctcgtcctcggtctcaccggcaccggtgccgaggcgggt
tcccgggacctcggccgccaggtcctcggcgccaacgacggctggggctccgagggcgcc
ggcacgaccggcggttcggccgccgacgccgagcacgtctacacggtcaccacctgggcg
gagttcaaggccgcgctcgccgccggcggcaccgcacccaggatcatcaaggtcaagggc
atgatcgacgccgtctcggagggctgcgaggccttcgtcaccggcggctacgacctccag
cagtacctcaaggactacgacccggccgtctacggcaacgacaaggtcgccatggggccg
caggaggacgcgcgggtcgcgtccatggccaaccagaatgcgcagatcaaggccttcgtc
cccagcaacaccaccatcgtcggcgtcgggaagaactccggcatcctcggcggcagcctc
cagatcttcggcgtctcgaacgtcatcctgcgcaacctcaccatcgaggccccgctcgac
tgcttccccaagtgggacccgaccgacgacaacaacaccggcaactggaactccgagtac
gacaccgtggtcgtctacggcacggaccacgtgtggctcgaccacaacacgttcaccgac
ggccgcttccccgacagcgagcggcccgtctacttcggcaaggtcttccagcagcacgac
gggctgacggacatcgtgcgcggctccaaccacgtgaccgtgtcctggaaccgctacgag
aaccacgacaagaacatgctgatcggcaacggcgacggcctcgccgccatcgacgccggc
aagctcaaggtcaccatgcaccacaaccgcttcgacgggatcctccagcgttccccgcgc
gtgcggttcgggcaggtcgacgtctacaacaaccactacgtggtgaacgaggaacagcag
gacgactactacatcttcggtgtcggcatctcctcgcagctccacgccaccgacaacgcc
atctcgctgccgcccggggcgagcgtcggcaaggctttgaagaagtggagcgaggccccg
ctgaccgccgagaacaactacgtcaacggcaggcggaccgacctgatcgccgtccacaac
gcggagatcccgtcggagaccctccagtcgggcgccggatggaagccgaccctgcggacc
aaggtcgaccaccccaaggcggtcccggggatcgtcgcgtaccgcgcgggcgccggccac
ctgcgctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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