KEGG   Streptomyces lincolnensis: SLINC_6642
Entry
SLINC_6642        CDS       T04801                                 
Name
(GenBank) rhamnogalacturonase B precursor
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
sls  Streptomyces lincolnensis
Brite
KEGG Orthology (KO) [BR:sls00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    SLINC_6642
Enzymes [BR:sls01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     SLINC_6642
SSDB
Motif
Pfam: RhgB_N CBM-like fn3_3 CarboxypepD_reg
Other DBs
NCBI-ProteinID: ANS68866
UniProt: A0A1B1MJR6
Position
complement(7975074..7976753)
AA seq 559 aa
MPGSASNRPVRRRAFVLGTAAAAGSAALAGPLARTASAAAFGYSDDGTNYVVDTGAGLVF
KVNKSNGDLTSLVYKGTEYQGYGGMNSHVESGLGASTVTIRQSGTTILISVTHGTLKHYY
AARSGENNIYLWTHRADTSVASSRYIVRVKKGLFLNDEPDSYTYTNSTVEASDVFAKSDG
QTRSKHYSKLRVMDYSHIGWSANGVGLWMVRSNHEKAAGGPFYRSLLRHQSADGGGLYEI
LHYAQNQTENERFGLQGPYVIAFTDGGAPSSSLFPGTLTTSWADSLGISGYVGASGRGRV
AGVGITGRNTAHPYTVALANPAAQYWGSARSSDGYFSIGGVLPGTYTLTVFKNELGVYTT
SVTVTAGGTTTLNSIAVPSTNDPSNASAIWRINDWTGTPAGFKNADLMTYAHPSDVRAAA
WTGNVVIGSGSETSAFPCYLWKDVNSGLLVYFKLTAAQAAAAHTLRIGVTTAYANGRPQI
AVNSWTSAIPSPPTQPSTRSLTNGSYRGNNHTFTYSVPATAWLTDTGQYNVLKIDVVSGS
GAAGYLSAGTSIDAIDLLA
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgcccggatccgcctcgaacagaccggtccgacgccgcgccttcgtcctcggcacggcg
gccgccgcaggttccgccgcgctcgccgggccgctcgcccggaccgcctccgccgccgcc
ttcggctacagcgacgacggcacgaactacgtcgtcgacaccggcgccggcctggtcttc
aaggtcaacaagtccaacggcgacctgacctcgctggtctacaagggcaccgagtaccag
ggctacggcggcatgaactcgcacgtcgagtccggcctcggcgcctccaccgtgaccatc
aggcagtccggcacgaccatcctgatctccgtcacgcacggcacactcaagcactactac
gcggcccgcagcggcgagaacaacatctacctgtggacccaccgggccgacacctccgtc
gcgtcgagccggtacatcgtgcgcgtgaagaagggcctgttcctcaacgacgagcccgac
tcctacacgtacacgaactccaccgtcgaggcctcggacgtgttcgcgaagtccgacggc
cagacccgctccaagcactactcgaagctgcgcgtcatggactacagccacatcggctgg
agcgcgaacggcgtcggcctgtggatggtccgctccaaccacgagaaggccgccggcggc
cccttctaccgctcgctgctgcgccaccagagcgcggacggcggcggcctgtacgagatc
ctgcactacgcccagaaccagaccgagaacgagcgtttcggcctccagggcccctacgtc
atcgcgttcacggacggcggcgccccctcctcgtcgctgttcccgggcacactgaccacc
tcctgggccgactcgctcggcatctccggctacgtcggcgcgagcggccggggccgggtc
gcgggcgtcggcatcaccggccggaacaccgcccacccctacaccgtcgcgctcgccaac
ccggccgcccagtactggggttcggcccgctcctccgacggctacttctccatcgggggt
gttctgccggggacgtacacgctgaccgtcttcaagaacgaactcggcgtgtacaccacc
tcggtgacggtcaccgccggtggcaccacgaccctgaactcgatcgcggtcccgtccacg
aacgacccgtccaacgcgagcgccatctggcggatcaacgactggaccggcaccccggcc
ggcttcaagaacgccgacctgatgacgtacgcccacccgtcggacgtgcgggccgccgcc
tggacgggcaacgtggtgatcggcagcggcagcgagacctcggccttcccctgctatctc
tggaaggacgtcaacagcggtctgctggtgtacttcaagctgaccgccgcccaggccgcc
gccgcgcacaccctgcgcatcggcgtgacgacggcctacgccaacggccggccgcagatc
gccgtcaactcctggacctcggcgatcccctccccgcccacccagccgagcacccggtcc
ctgaccaacgggtcctaccggggcaacaaccacacgttcacctacagcgttccggcgacc
gcctggctcacggacaccggccagtacaacgtgctgaagatcgacgtggtgagcggttcg
ggggccgccggctacctcagcgcgggcacctcgatcgacgcgatcgacctgctcgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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