KEGG   Sideroxydans lithotrophicus: Slit_0515
Entry
Slit_0515         CDS       T01196                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
slt  Sideroxydans lithotrophicus
Pathway
slt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Slit_0515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slt03400]
    Slit_0515
Enzymes [BR:slt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Slit_0515
DNA repair and recombination proteins [BR:slt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Slit_0515
    RecFOR pathway proteins
     Slit_0515
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 Mg_chelatase AAA_18 AAA_22 nSTAND3 AAA_3 Rad17 AAA_2 AAA_14 TsaE AAA_17 AAA_25 RNA_helicase AAA_28 NB-ARC NTPase_1 Parvo_NS1 TniB AAA_24 IstB_IS21 NACHT DUF815 Sigma54_activ_2 AAA_33 ABC_tran AAA_19 bpMoxR PaRep2b
Other DBs
NCBI-ProteinID: ADE10755
UniProt: D5CMR9
Position
521274..522329
AA seq 351 aa
MIHNDDLSAEPRIISAAPASPQEEALDRALRPKQLDEYVGQEKIRGQLEIFIQAAKKRKE
PLDHVLLFGPPGLGKTTLAQIIAREMGVNIRHTSGPVLERAGDLAALLTNLEPHDVLFID
EIHRLSPVVEEILYPALEDYQIDIMIGEGPGARSVKIDLPPFTLVGATTRAGMLTNPLRD
RFGIVARLEFYTPEELQRIVTRSSGLLELPISPDGALEIARRSRGTPRIANRLLRRVRDY
ADVRAEGNATREVADAALTMLDVDSRGLDVMDRKLLQTVIEKFMGGPVGVDNLAAAIGEE
RDTIEDVLEPYLIQQGYLQRTPRGRMATANAYQHFGLIQPRNGNNKELWDE
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgatccacaacgacgacctatccgccgaaccgcgcatcatctccgccgcgccggcctcg
ccacaggaggaggcgctggaccgcgcgctgcgccccaagcagctcgacgaatatgtcggg
caggagaagatacgcggccagctggagatattcatccaggccgcaaagaagcgcaaggaa
ccgctcgaccacgtgctgctgttcggcccgcccggtctgggcaagaccacgctggcgcag
atcatcgcgcgcgagatgggcgtcaacatccgccacacctccggcccggtgctggagcgc
gcgggcgacctcgccgcgttgctgaccaacctcgaaccgcacgacgtgctgttcatcgac
gagatccaccgcctgtcgccggtggtggaagagatactctatcccgcgctggaggattac
cagatcgacatcatgatcggcgaggggccgggcgctcgctcggtgaagatcgacctgccg
ccgttcacgctggtcggcgcgaccacgcgcgccggcatgctgaccaatccgctgcgcgac
cgcttcggtatcgtggctcggctggagttctatacgccggaagaattgcagcgcatcgtc
acgcgctcgtccggtttgctggaactgcccatctcgccggacggtgcgctggagatcgcc
aggcgttcgcgtggcacgccgcgcatcgccaaccgcctgctgcgccgcgtgcgcgattac
gccgatgtgcgcgccgagggcaatgccacacgcgaagtggcggatgccgcactgaccatg
ctggatgtggattcgcgcgggctggacgtgatggaccgcaagttgttgcagacggtgatc
gaaaaattcatgggcggaccggtcggggtggacaacctcgccgctgcgataggcgaagag
cgcgacaccatcgaggatgtgctggagccctacctcatccagcaaggctacctgcaacgc
acgccgcgtggccgcatggcgacggcgaacgcctatcagcactttggcttgatccagccg
cgcaatggcaacaacaaggaactgtgggatgagtaa

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