KEGG   Sideroxydans lithotrophicus: Slit_1268
Entry
Slit_1268         CDS       T01196                                 
Name
(GenBank) RNA-binding S4 domain protein
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
slt  Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:slt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slt03009]
    Slit_1268
Enzymes [BR:slt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     Slit_1268
Ribosome biogenesis [BR:slt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Slit_1268
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 Ub-Mut7C
Other DBs
NCBI-ProteinID: ADE11505
UniProt: D5CRB9
Position
1257710..1258552
AA seq 280 aa
MIDQAETSQPGERLQKVLAQAGIGSRREMEEWISAGRVTVNGTVATLGMRVAEGDKVQVD
GRNVRLQLQTEQTMPRILLYHKQEGEIVSRDDPGERASVFDALPKLRGQKWIAIGRLDFN
TSGLLIFTTSGELANRLMHPRFEVEREYAVRVQGQMTPEHMRQVTKEGIELDDGVVRFEQ
LSDEGGEGFNHWYRLVLKEGRNRVVRRTFEALGLPVSRLMRVRFGIIGLPPRIKRGMMAE
LGDNEVRSILEWVGLPVGVARQVVDDGRRNKLQRARIRKN
NT seq 843 nt   +upstreamnt  +downstreamnt
atgatcgatcaagccgaaacaagtcagccaggcgagcgattgcaaaaggtgctggcacag
gcgggtattggttcacgccgtgagatggaagagtggatcagcgcaggaagagtgaccgtg
aacggtacggttgcaacgttggggatgcgggttgcagagggtgacaaggtgcaagtggac
ggacgtaatgtacgtcttcaattgcagaccgagcaaaccatgccacgcattctgctgtac
cacaagcaggaaggcgaaatagtcagccgcgacgatcccggcgagcgtgccagcgtattc
gatgccttgccaaaattgcgcggacagaaatggatagcaatcggacgtttggacttcaat
accagtgggttgctcatcttcacaacttctggcgaactggcgaatcgcctgatgcacccc
cgtttcgaggtggagcgcgaatatgccgttcgtgtgcagggccagatgacgccggagcac
atgcggcaagtgaccaaagagggcatagaactcgatgatggcgtagtacgtttcgagcag
ctcagcgatgaaggcggcgaagggttcaaccactggtatcgactggtgctgaaggaaggc
cgtaatcgcgtggtgcgccgcactttcgaggcattgggcttgccggttagccgcctgatg
cgagtgcgcttcggtatcatcggtcttccgccccgtatcaaacgcggcatgatggccgaa
ttgggcgataacgaggtgagatcgatactcgagtgggtgggtttgccggtgggagttgcc
agacaggtggttgacgatggccggcgcaacaagttgcagcgtgctcggatacggaaaaat
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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