KEGG T01196: Slit

Sideroxydans lithotrophicus: Slit_1835

Entry

Slit_1835 CDS T01196

Definition

2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

slt Sideroxydans lithotrophicus

Pathway

slt00020	Citrate cycle (TCA cycle)
slt00310	Lysine degradation
slt00380	Tryptophan metabolism
slt01100	Metabolic pathways
slt01110	Biosynthesis of secondary metabolites
slt01120	Microbial metabolism in diverse environments

Module

slt_M00009	Citrate cycle (TCA cycle, Krebs cycle)
slt_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:slt00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:slt00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:slt00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1863528..1866407)

AA seq 959 aa
MNAPGNDYLQMMQNTSLLSGGNNAFVESLYEDYLNDASAVPAEWRAYFDKLQAPNAPHDV
AHGPIQRGFLQLGKRQAETPVHADETRKQAAVLQLINAHRFLGVRNADLDPLQRHAKPEV
AELNPSYYGLSEADMDATFFTGSLVGGARMTLREILQRLRRIYCSSVGAEYMYISSVPKK
RWIQARLEGPAGELNYSGEVRKRVLERLTAAEGLERYLHTKYVGQKRFSLEGGDTLIPLL
DHLLQRAGAQGVKESVIGMAHRGRLNVLVNTLGKLPKDLFAEFEGIHTEHLASGDVKYHQ
GFSSDIATPGGPMHLTLAFNPSHLEIVNPVVEGSVRARQHRRLDLKGKQVLPILLHGDAA
FAGQGVNQETFNLSQTRGYGTGGTVHIVINNQIGFTTSDPRDTRSSLYCTDVAKMVEAPI
FHVNADDPEAVLLVTEIALDYRMQFGKDVVVDMVCFRKLGHNEQDEPLVTQPLMYRKVNQ
HPGTRALYAGRLVEQGVLAAGEPDAMVVDYRRAMDEGRNPIQPVLTGFKEEFAVSWSKFK
GGVSWQTPAVTSLSRERLQQLAERLVKLPENFKLHSRVEKIIADRIAMGKGELALDWGMA
ENLAYASLVSEGYPVRLSGEDCGRGTFFHRHAVLHDQNRVQWDKDSFIPLQHIAQDQADF
IVIDSILSEEAVLGFEYGYATAEPNTLTVWEAQFGDFANGAQVVIDQFIASGEAKWGRLC
GLTMLLPHGYEGQGPEHSSGRIERYLQLCADYNIQVCIPSTAAQIFHLLRRQMVRPYRKP
LIVFTPKSLLRSKDAASPLKWFSEGTFQTVMPEADTLDAAKVKRIIACSGKVYFDLIKHR
REKGIENMAIIRLEQLYPFPHDEFTAQVAAYPNATEVVWCQEEPGNQGAWHRVQHYLLRH
MRTGMRLDYALRPSSASPAAGYLATHNEQQKEVIEAAFRPDLDVKNNPLDRHHELRSVE

NT seq 2880 nt +upstreamnt +downstreamnt
atgaatgcaccgggaaatgattatctgcaaatgatgcagaacacgtcgttgctttctggc
ggcaacaacgcctttgtcgagagcctgtatgaagactatctgaacgatgcatctgcggtc
cctgcagaatggcgcgcctatttcgacaaactgcaagctccaaacgcaccgcatgatgtg
gcgcatggcccgatccagcgtggcttcctgcaattgggtaaacgccaggcggagacgccg
gtgcatgccgacgagacgcgcaagcaagccgcggtattgcaactcatcaatgcccatcgt
ttcctcggcgtgcgcaacgccgatctcgatccgttgcagcgccatgccaagcccgaagtg
gccgaactgaatccatcctattacggcctgagcgaagctgatatggacgccacctttttc
accggatccctggtcggtggcgcgcgcatgaccttgcgcgaaatattgcagcgcctgcgc
cgtatctactgcagcagtgtcggtgccgagtacatgtacatcagcagcgtgcccaagaaa
cgctggatacaggcgcgcctggaaggccccgccggcgagctgaattattccggagaggtc
aggaagcgtgtgctggagcggctgactgcggcagaagggctggaacgttacctgcacacc
aaatatgtggggcagaagcgcttttcgctggaaggcggcgataccctgatccccttgctc
gatcatctgttgcagcgtgccggggctcagggcgtcaaggagtccgtgatcggcatggcg
catcgcgggcgcctgaacgtgctggtcaacacgctgggaaaactgcccaaggacctgttt
gccgagttcgagggcatccataccgagcatctggcttccggcgacgtgaaataccaccag
ggcttctcttcggatatagccacgcccggcggccccatgcaccttacgctggccttcaat
ccctcgcatctggagatcgtcaatccggtggtggaggggtcggtgcgcgcacggcagcat
cgccgtctggatctgaaaggcaaacaggtgttgccgatcctgctgcacggcgatgccgca
ttcgccgggcagggcgtgaatcaggaaacgttcaacctgtcacaaacgcgcggttacggg
acgggcggtaccgtgcacatcgtgatcaacaaccagatcggttttaccacctccgatccg
cgcgacacacgctcgtcgctgtattgtaccgatgtggcgaagatggtcgaagcgccgata
ttccatgtcaatgccgatgatccggaagcagtgttgctggtcaccgagatcgccctcgac
taccgcatgcagttcggcaaggacgtggtggtggacatggtgtgtttccgcaagctggga
cacaacgaacaggatgaaccgctggtcacccaaccgctgatgtatcggaaagtcaatcaa
catcccggtacccgcgccttgtatgccggccggctggtcgagcagggcgtattggcagcc
ggtgaaccggatgccatggtggtcgattaccgccgcgccatggatgaaggtcgcaatccc
atccagccggtgttgaccggattcaaggaagaattcgcggtgagctggtcaaaattcaag
ggaggggtctcgtggcagacgcctgccgtgaccagtctgtcgcgcgaacgtttgcagcag
ctggcagagcgtctggtcaaactgccggagaatttcaaactgcactcgcgcgtggaaaag
atcattgccgaccgcatcgcgatgggcaagggagagctggcgctggattgggggatggcc
gagaatctggcttacgcaagtctggtgtcggagggttatccggtgcgactttccggagag
gactgcggacgcggtactttcttccatcgccacgctgtgttgcatgaccagaaccgcgtg
cagtgggacaaggattcgttcatacccctgcagcacattgcgcaggatcaggccgacttc
atcgtgatcgactcgatcttgtcggaagaggccgtgctgggcttcgaatacggttacgcc
actgccgagccgaacacgctgaccgtctgggaagcgcagttcggcgatttcgccaatggc
gcgcaagtcgtcatcgaccagttcatcgcttccggcgaagccaagtggggcaggttgtgc
ggactgaccatgctgttgccgcacggttacgagggacaggggccggagcactcgtccggc
cgcatcgaacgctatctgcaactctgtgccgactacaacatacaggtgtgcatcccgtcc
actgctgcgcagatattccatctgttgcgccgccagatggtgcgcccctatcgcaagccg
ctgatcgtgttcactcccaagagcctgctgcgcagcaaggatgcggcgtcgccgctgaaa
tggttttcggagggcacgttccagaccgtgatgccggaagccgatacgctggatgcagca
aaggtcaagcgcatcatcgcatgcagcggcaaggtgtatttcgacctcatcaagcaccgc
cgcgaaaagggcatcgagaatatggccatcatccggttagagcagctctatcctttcccg
cacgacgaattcacggcacaggtcgcagcctatccaaatgcgacagaggtggtgtggtgc
caggaggagcccggcaaccagggggcatggcatcgcgtccagcattacctgttgcgccat
atgcgcaccggtatgcgtcttgattatgcattgcgtccctcttctgcttcgcccgcagcc
gggtatctggccacgcataacgagcagcagaaggaagtgatcgaggccgccttccgtccg
gatctggatgtgaagaacaatcccctggacagacaccatgagttgcgttcggtcgaatga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SLT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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