KEGG T01196: Slit

Sideroxydans lithotrophicus: Slit_2115

Entry

Slit_2115 CDS T01196

Definition

tryptophan synthase, subunit beta

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

slt Sideroxydans lithotrophicus

Pathway

slt00260	Glycine, serine and threonine metabolism
slt00400	Phenylalanine, tyrosine and tryptophan biosynthesis
slt01100	Metabolic pathways
slt01110	Biosynthesis of secondary metabolites
slt01230	Biosynthesis of amino acids

Module

slt_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:slt00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:slt00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2142001..2143200)

AA seq 399 aa
MTYNFPDSSGHFGQFGGIYMAETLIPAVEELRQQYLRFRDDPEFKAEFAYELKHYVGRPS
PIYHAKRLSDSLGGAQIYLKREDLNHTGAHKINNAIGQALLAKRMGKKRVIAETGAGMHG
VATATVAARFGMECIVYMGAEDIQRQAPNVFRMKLLGAKVVPVESGSRTLKDACNEAIRD
WVTNVESTFYIFGTAAGPHPYPMMVRDFQCVIGNEAKVQMPEMIGRQPDTVIACVGGGSN
AIGMFYPYIEVPNVQIIGVEAGGHGIASGQHAAPLTGNAKVGVLHGNKVYLMQDENGQII
ETHSISAGLDYPGVGPEHCLLKDIGRAQYVAINDDEAIAAFDALCRLEGIIPALESSHAL
AHAMKIAPTMGNDKVLLVNLSGRGDKDMNTVAKLKGITL

NT seq 1200 nt +upstreamnt +downstreamnt
ttgacttacaactttcctgattcatccggccatttcggccagttcggcggcatctacatg
gccgagacgctcattccggcggtggaggagttgcgccagcagtacctgcgctttcgcgac
gatccggaattcaaggctgaattcgcttatgagctgaagcactacgtcggccgccccagc
ccgatctatcacgccaagcgcctgtcggacagcctgggcggtgcgcagatctacctcaag
cgcgaagacctcaaccataccggcgcgcacaagatcaacaacgccatcggtcaggccctg
ctggccaagcgcatgggcaagaaacgcgtcatcgccgagaccggcgccggcatgcatggc
gtggcgacggcgacggtggccgcacgctttggcatggaatgcatcgtctatatgggcgcg
gaagacattcagcgccaggcgcccaatgtgttccgcatgaagctgctgggtgcgaaagtg
gtgccggtggaaagcggttccagaacgctcaaggacgcctgcaacgaagcgatccgcgat
tgggtcaccaatgtcgaaagcacgttctacatcttcggcaccgcggcggggccgcaccca
tatccgatgatggtgcgtgatttccagtgcgtgatcggcaacgaagccaaggtgcagatg
ccggagatgatcgggcgccagcccgatacggtgatcgcctgcgtcggcggcggttccaat
gccatcggcatgttctatccctatatcgaagtgccgaacgtgcagatcatcggcgtggaa
gcaggtggtcacggcatcgccagcgggcagcatgccgcgccgctcaccggcaatgccaag
gttggcgtgctgcacggcaacaaggtctacctgatgcaggacgagaacggacagatcatc
gagacgcactccatttccgccggactggactatccgggcgtaggtcctgagcattgcctg
ttgaaggacatcggccgtgcgcaatatgtcgccatcaacgacgatgaagccatcgctgcc
ttcgatgcgctgtgccgtttggaaggcatcattcccgcgctggaatcgagccatgcactg
gcgcacgcgatgaagatcgcgccaaccatgggtaacgacaaggtgctgctggtgaacctg
tccggtcgcggcgacaaggacatgaacaccgtcgccaagctgaaggggatcacgctatga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SLT (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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