KEGG   Sideroxydans lithotrophicus: Slit_2824
Entry
Slit_2824         CDS       T01196                                 
Name
(GenBank) RNA-binding S4 domain protein
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
slt  Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:slt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slt03009]
    Slit_2824
Enzymes [BR:slt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     Slit_2824
Ribosome biogenesis [BR:slt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Slit_2824
SSDB
Motif
Pfam: S4 PseudoU_synth_2
Other DBs
NCBI-ProteinID: ADE13049
UniProt: D5CPQ4
Position
complement(2842110..2842928)
AA seq 272 aa
MTVPVRLARRLAELVHCSRREAELYIAGGWVSVDGQVVEEPQFMVSQQKVELHPDATLVP
VESVTILFHQPSPQPSDGTTSHSTRPPKNGDQVAGYPSGRGSDREGQSLILADSIRQLPS
ADTRAADDRSGIRLLKQHFVRLTQCLPLQLHASGLTVFTQDYRVIRKLTEDAATIEQEYV
VEVAGELVPDGFKLLNHGLSFNGKPLPPVKVSWQNETHLRFALKGAQPGQVAHMCLAVGL
QVQAMKRLRIGRMSMCKLPLGQWRYLMPYEKF
NT seq 819 nt   +upstreamnt  +downstreamnt
atgaccgtccccgtccgtctcgccaggcgtctggccgaactggttcactgctcgcgccgc
gaggcggagctgtatattgccggtggctgggtgagcgtggacggacaggtggtggaagaa
ccgcagttcatggtgtcgcagcagaaggtcgagctgcaccccgatgccacgctggttccg
gttgagtcggtgaccattttatttcatcaaccctcaccccaaccctctgatggaactact
agccattcgactaggccgccaaaaaacggcgaccaagtcgctggttatcccagcgggaga
gggagcgatcgtgaagggcaatctttaatccttgccgactcgatcaggcaattgcccagt
gccgatacgcgcgcagcggacgaccgttccggtatccgcttgctcaagcagcattttgtg
cgactgacgcaatgcttgccgctgcaattgcacgcgagcggcctgaccgtatttacccag
gattatcgtgtcatccgcaagttgaccgaggatgctgccacgatcgaacaggagtatgtc
gtcgaggttgccggcgagctggtgcccgatgggttcaagctgctcaaccacgggctcagt
ttcaacggcaagccgttgcctccggtcaaggtgagctggcagaacgaaacacatttgcgt
ttcgccctcaaaggcgcgcaaccaggccaggtcgcccatatgtgcctggcagtcgggctg
caggtgcaagcgatgaagcgcttgcgtatcgggcgcatgtcgatgtgcaaattgccgctc
gggcaatggcgctatttgatgccgtatgaaaagttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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