KEGG   Streptomyces lavendulae subsp. lavendulae: SLAV_09920
Entry
SLAV_09920        CDS       T05314                                 
Symbol
rnd
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
slx  Streptomyces lavendulae subsp. lavendulae
Brite
KEGG Orthology (KO) [BR:slx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slx03016]
    SLAV_09920 (rnd)
Enzymes [BR:slx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SLAV_09920 (rnd)
Transfer RNA biogenesis [BR:slx03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SLAV_09920 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ATZ23852
UniProt: A0A2K8PAT8
Position
2327185..2328465
AA seq 426 aa
MTDAQETAAGLRTTTGGGPPDEEVSSDGLPVPLLEPREGIPPVVADADGLARVVAAFAAG
TGPVAVDAERASGYRYGQRAYLVQLRREGAGSALIDPVGCPDLSSLGEALSGTEWILHAA
TQDLPCLREIGMAPTSLFDTELAGRLAGFPRVGLGAMVESVLGYVLEKGHSAVDWSTRPL
PEPWLRYAALDVELLVDLRDALEKELDRQGKLEWARQEFDAIASAPPAPPRKDPWRRTSG
MHKVRRRRQMAVVRELWESRDRIAQRRDVSPGKVLGDAAIVEAALALPANVHALSALPGY
GQRMGRRQLDQWMAAVDRAKALPENELPQPGATPSGPPPPRSWADKDPAAAARLSAARSA
VSALAEGLNLPQENLITPDTVRRLCWEPPQRLEPGTVAEALAGYGARPWQIEQVTPVLVT
ALAATA
NT seq 1281 nt   +upstreamnt  +downstreamnt
gtgaccgacgcccaagagaccgcagcaggcctgcgcaccaccaccgggggcggccccccg
gacgaagaggtttcgtccgatgggctgcctgttccgttgctagaaccccgcgaggggatc
cccccggtcgtggccgacgcggacgggctggcccgggtcgtcgcggccttcgccgcaggc
accggacccgtggccgtcgacgccgaacgcgcctccggataccgctacgggcagcgcgcc
tacctggtgcagctgcgccgcgaaggggccggctccgcgctgatcgaccccgtcggctgc
ccggacctctcctccctgggagaggcgctgtccggcaccgagtggatcctgcacgccgcc
acccaggacctgccctgcctgcgcgaaataggcatggcccccacctccctcttcgacacc
gagctggccggccggctggccgggttcccccgggtcggcctcggggcgatggtcgagagc
gtgctgggctacgtactggagaagggccactcggccgtcgactggtccacccgccccctg
cccgagccgtggctgcgctacgccgcgctcgacgtggaactgctggtggacctgcgggac
gcgctggagaaggaactcgaccggcagggcaagctggagtgggcccgccaggagttcgac
gcgatcgcctccgcgccgcccgccccgccgcgcaaggacccctggcgccgcacctccggc
atgcacaaggtgcgccggcgccggcagatggccgtcgtccgcgagctgtgggagtcccgc
gaccggatcgcccagcgccgggacgtctcccccggcaaggtgctcggcgacgcggcgatc
gtggaggcggccctggccctccccgcgaacgtccacgccctgtcggcgctgcccgggtac
ggacagcgcatgggccggcgccagctggaccagtggatggccgccgtggaccgggccaag
gccctgcccgagaacgagctgccgcagccgggggcgaccccgtcgggcccgccgccgccg
cgctcctgggcggacaaggacccggccgccgccgcgcgcctgtccgccgcccgcagcgcc
gtctctgcgctggcggaggggctgaacctgccccaggagaacctgatcactccggacacc
gtgcgccggctgtgctgggagcccccgcagcggctggagcccggcacggtcgccgaggcc
ctcgccggctacggcgcccgtccctggcagatcgaacaggtgacgcccgtgctggtcacg
gccctcgcggcaacggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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