KEGG   Solanum lycopersicum (tomato): 101244826
Entry
101244826         CDS       T02665                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03083  Polycomb repressive complex
sly04120  Ubiquitin mediated proteolysis
sly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101244826
   04120 Ubiquitin mediated proteolysis
    101244826
  09126 Chromosome
   03083 Polycomb repressive complex
    101244826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101244826
   04121 Ubiquitin system [BR:sly04121]
    101244826
   03036 Chromosome and associated proteins [BR:sly03036]
    101244826
Membrane trafficking [BR:sly04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    101244826
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     101244826
   Cul7 complex
     101244826
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     101244826
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     101244826
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 101244826
NCBI-ProteinID: XP_004250058
Position
11:complement(2610725..2611583)
AA seq 189 aa
MSSSSSEPESNILTLKSADNNEFQVEASIAVQSTAIKNMVEDGYTDIPLVNISSEVLIKI
LDYLKKHAENSGCSEEELNEFDNEFVKMSIKKMSLFVYAASFLHIPGLTSLLCQTIADRI
KNKSVNAVRRIFEIINDYTPEEEAEVRAEHDWAHDGELDDTVEEDDEVRDENDGENDDNG
TPEDETGEN
NT seq 570 nt   +upstreamnt  +downstreamnt
atgtcgtcttcatcatcggagccggagagcaacattctgaccttgaaatccgccgataac
aacgaatttcaggtggaagcatcgatcgccgttcaatctacagctatcaaaaacatggta
gaggacggttacacagacattccgctagtgaacattagtagcgaagtccttatcaaaatt
ctcgattacctgaaaaagcacgcggagaattccggttgtagcgaagaagaactgaacgaa
tttgacaatgaattcgttaagatgagtatcaaaaaaatgtctctgtttgtatacgctgct
agtttccttcacattcctggtttgacgagcctgttatgccagacgattgctgatagaatt
aagaacaaatcggtgaatgctgttcggaggatttttgagatcattaatgattatacaccg
gaggaagaagcagaggttcgtgctgaacatgactgggcacatgatggagagcttgatgat
actgttgaggaagacgatgaggttcgtgatgaaaatgatggagagaatgatgataacgga
acaccagaggatgaaacaggtgaaaattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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