KEGG   Solanum lycopersicum (tomato): 101246047
Entry
101246047         CDS       T02665                                 
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
  KO
K10779  transcriptional regulator ATRX
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sly03000]
    101246047
   03036 Chromosome and associated proteins [BR:sly03036]
    101246047
Transcription factors [BR:sly03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    101246047
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101246047
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII Helicase_C_2
Other DBs
NCBI-GeneID: 101246047
NCBI-ProteinID: XP_010319828
Position
4:complement(45593279..45638939)
AA seq 1488 aa
MEDEEEKHIEMEEEDVEKASSDPSDDSFINDDDSDDPIMDDDDDDNQHSLPEEPLTDKEI
EELIAELLETESKAAEAQEALEEESVSKVEADVREELSQTLKGDELENAVADEMATFKEE
WETVLDELETESAHLLEQLDGAGIELPSLYKWIESQAPHGCCTEAWKNRTQWVGSELTSD
LTGAIADAEKYLQIHRPVGRKHGKVLEEGASGFLAKKLAGNDGSEAQGGSSGVDWGSFSK
LCSDNSSSSMGTTSFGSKDWSSVYLASTPQQAAELGLKFPGVDEVEEIDDIEDSSGDPFV
ADAIANERELNLSEEQKRKFKKVKEEDDLKTDLKLRRCLKQRRHKNRQKLEEIQEDTTDV
TTGYLSQDFGFDKKEYSTVDDGDAPKSNEVTSVIDATVSEHEIDAEAKGLKLLHNFEEME
PQSKKARIIIPDSDEEDLPGKMLSPTCSLSETEDQSNPQRDGDNVLPVSSLPVCNEKQNF
RCTACDKVAIEVHAHPLLRVVLCLDCKTSMKTKMQDVDCSECYCRWCGRCSDLLSCKSCK
RLFCSVCIRRNLGEEILTGIKTSGWQCCCCSPSILLPLVSVLEKIMESQGLVDSNTDTDS
DNSDADINEHKSTKRRPKKKIRRILDDTELGEETKRKIAIEKERQERLKSLGAKFSSKTM
FMDSGGCSKSSYETGSLEMLGDIQTGYIVNVVREEGEEAVRIPRSISAKLKSHQVAGIRF
MWENIIQSIRKVKAGDKGLGCILAHTMGLGKTFQVISFLYAAMRCVDLGLRTALIVTPVS
VLHNWRQEFIKWEPSEMKPLRVFMLEEVPRERRAELLQKWRVKGGVFLIGYTAFRNLTLG
KNIKERHVAREICQALQDGPDILVCDEAHIIKNTRADVTQALKQVKCQRRIALTGSPLQN
NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTADDVKIMNQRSHILYEQLKG
FVQRMDMNVVKMDLPPKTVYVMSVKLSPLQRKLYKRFLDVHGFTKDKVSGEKIMKRSFFA
GYQALAQIWNHPGILQLTRENRISSRPEDPVEILLADDCSSDENTYYNVVSGVSAEKTNS
NNEALKKNHNGFLHGDWWSDLLDNNCKEVDYSGKMVLLLDILTMSSNVGDKALVFSQSLS
TLDLIEQYLSKLTRPGKKGKYWKRRKDWYRIDGRTESSERQKLVDCFNSPLNRRVKCVLI
STRAGSLGINLYAANRVIIVDGSWNPTHDLQAIYRAWRYGQTKPVFAYRLLAHGTMEEKI
YKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDESCDIPLELKQVREHAGEANSN
VNVGSVQKQKLTFPNGSSSSDKLMQSLIDRHHPRWIANYHEHESLLQENEDEKLSKEEQE
MAWEVYRRSIEWEERRVLPDEPVEQQHISTTESLLKQKPFVPRATVFPPADRNLVFAVGS
SRCRLVHRKCTKLSHLLTLRSQGTKWGCSTVCGECAQEIKWEGVRSAK
NT seq 4467 nt   +upstreamnt  +downstreamnt
atggaagatgaagaagaaaaacacattgaaatggaagaagaagatgtagaaaaggcttct
tctgatccttctgatgattcgtttatcaacgatgatgattcagatgatcctataatggat
gacgatgatgatgacaatcaacactcgcttcctgaggaacccttaactgataaggaaatt
gaagagctcattgctgagcttttagaaactgagagtaaggctgcagaggctcaagaggct
ttagaagaagagtcagtctctaaagtggaggctgatgttagagaagagttgtcacaaact
cttaaaggagatgagttggaaaatgctgtagctgatgaaatggcaaccttcaaagaggag
tgggaaactgttctcgatgaactggagactgaaagtgctcatttattggaacaactggat
ggtgctggaattgaactccctagtctctataagtggatagagagtcaggctcctcacggt
tgctgcactgaagcatggaaaaataggactcagtgggttggttctgagctgacaagtgac
ctcactggagcaattgctgatgctgagaagtatcttcaaatccacagacctgtaggaagg
aaacatggaaaagtcttggaggagggtgccagtggtttcttggcaaaaaaacttgctggg
aatgatggcagtgaggctcagggagggagcagtggtgtagattggggctcttttagcaaa
ttatgctctgataactcttcatcatctatgggtactacttcatttggcagcaaagattgg
tcctctgtttaccttgctagtacaccacagcaagctgctgagctaggactaaaatttcct
ggagtggatgaggttgaggagattgatgatattgaagacagttctggtgatccatttgtt
gcggatgccattgcaaatgaaagagagttaaatctttctgaagagcagaagaggaagttt
aagaaggttaaagaggaagatgatctaaaaactgatctgaagcttaggagatgtttgaaa
cagagaagacacaagaacagacagaaattggaggagatacaggaagatacaacagatgtc
actactggttatttatctcaagattttggctttgacaagaaagagtattccaccgttgat
gatggggatgcgccaaaaagcaatgaagttacatcggttattgatgccacagtttcagaa
catgaaattgatgctgaggccaaaggattgaaacttttacacaacttcgaagagatggag
cctcaaagtaaaaaggctcggatcattataccagatagtgatgaggaggatcttcctggg
aaaatgttgtctcctacatgtagtttgagcgagacagaagatcaatcaaatccacaaaga
gatggagataatgtgcttccagttagttcccttcctgtatgcaatgagaagcaaaatttt
cgctgcactgcttgtgataaagtggctattgaagtccatgcacatcctcttttgagagtt
gtcctttgcctggactgcaaaacttcaatgaaaacaaagatgcaggatgttgattgctca
gagtgctactgcagatggtgtgggcgttgcagcgatctgttaagctgtaaatcatgcaaa
aggttattttgtagtgtgtgtataaggaggaaccttggtgaagaaattttaacaggaatt
aaaacatctgggtggcaatgctgctgttgctccccaagtatcctgcttccgttggtttca
gtgttggagaagatcatggagtctcaaggtttggtagattcaaatacagacacggattca
gataactcagatgctgatatcaacgagcataaaagcaccaagagaaggcctaaaaagaaa
attagaagaatcctggatgatactgagttaggggaggagacaaaaaggaagattgcaatt
gaaaaggaacgccaagaacgcctcaaatctctgggagcaaaattttcaagcaagactatg
ttcatggattctgggggttgtagcaaaagctcgtatgaaactggtagcttggaaatgctt
ggtgatattcaaactggttacatagttaatgtggtgagggaggaaggggaagaggctgtc
aggattccacgcagtatctccgcaaaactaaaatctcaccaggttgctgggattcgattt
atgtgggaaaatattattcaatctatcaggaaagtcaaggctggggataaaggtcttggt
tgcatcctagctcatactatgggtctaggtaaaacgtttcaggtgatttctttcttgtat
gctgctatgaggtgtgtggatttaggattgagaactgctctcatagtcacgcctgtaagt
gttctgcataactggcggcaggaatttataaaatgggaaccatcagaaatgaagcctctc
cgtgtctttatgcttgaagaagttccaagggagagaagggccgagctactccaaaaatgg
agagtaaaaggtggcgttttcttaattggctacactgctttcagaaatttgacactaggg
aagaatataaaagagcgccacgtggccagagaaatttgtcaggctcttcaggacggacct
gacattcttgtttgtgatgaggctcatattatcaagaataccagagctgatgttactcaa
gccttgaaacaagtcaagtgccagagaaggattgcattaactggatctcctcttcaaaac
aatttgatggagtactattgtatggttgattttgtgagggaaggatttcttggcagcagt
catgaatttagaaaccgctttcagaatccgatagaaaatggtcaacacaccaattctaca
gctgatgatgttaagattatgaatcagcgatctcatattctctatgaacagttaaaagga
tttgttcaaagaatggacatgaatgtcgtgaaaatggatttgccaccaaaaactgtctat
gtgatgtctgtaaagctttctcctttacagagaaaattgtataaaagatttctagatgtt
catggcttcaccaaggacaaggtttctggtgagaagataatgaagagatcattttttgcc
gggtaccaagccttggctcagatatggaaccatcctgggattttgcaattgacgcgagaa
aacagaatctctagtcgtcctgaagatcctgttgagatccttcttgcagatgattgctca
agtgatgagaacacatattataatgtggtttctggagtttctgcagagaagacgaatagc
aacaatgaagctctcaaaaaaaatcataatggcttcctccatggggattggtggagtgat
cttctagataataattgcaaagaagttgattatagtggcaaaatggttttgctactcgac
atcctgacaatgagctctaatgttggtgacaaagcactcgtgtttagtcagagcttgtca
accctagatctcattgaacaatacctttcaaaactaacgcgcccagggaaaaaggggaag
tactggaaacggcggaaagactggtacaggattgatggaagaacagaatcatctgaaagg
cagaaacttgttgactgttttaacagtccattgaatagaagggttaagtgcgtactgata
tctactagagctggatctcttggtatcaatctttatgctgccaaccgtgtaattatagtt
gatggctcttggaatcctactcatgatcttcaagctatataccgagcttggaggtatggt
caaacaaaacctgtttttgcttaccgtttactggcacatggaacgatggaggaaaagata
tacaagcgccaggtaacaaaggaaggtcttgcagcacgggtggttgataggcaacaagta
catagaactatatctaaagaggaaatgttgcacctttttgaatttggagatgacgaaagc
tgtgatatacctctggaattgaagcaagttagagaacatgctggtgaagcaaactcaaat
gtaaatgttggaagtgttcagaaacaaaaattaacctttccaaatggaagttcttcttct
gacaagctaatgcaaagtttgattgacaggcatcatccgcggtggattgcgaattatcat
gaacatgaaagtctcctgcaagagaatgaagatgaaaagctatcaaaagaagagcaggaa
atggcgtgggaagtgtatcggagatctattgaatgggaagagaggagagttttgcctgat
gaacctgttgaacagcagcatatctctaccactgaatcattgttaaagcaaaagccattt
gttcccagggccaccgtttttccgccagcggaccgtaatcttgtatttgcagtggggagt
tctagatgccgtttggtgcataggaagtgcacaaagctatcacatttgcttactcttaga
agtcaaggcacaaagtggggttgcagcaccgtttgcggggagtgtgctcaagagatcaag
tgggagggtgttagatcagcaaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (73)   

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