KEGG   Solanum lycopersicum (tomato): 101246236
Entry
101246236         CDS       T02665                                 
Name
(RefSeq) elongator complex protein 3
  KO
K07739  elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sly03016]
    101246236
Enzymes [BR:sly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.311  tRNA carboxymethyluridine synthase
     101246236
Transfer RNA biogenesis [BR:sly03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    101246236
SSDB
Motif
Pfam: Radical_SAM_C Radical_SAM Acetyltransf_1 Acetyltransf_10 Acetyltransf_7 FR47
Other DBs
NCBI-GeneID: 101246236
NCBI-ProteinID: XP_004236359
Position
3:complement(63126028..63130536)
AA seq 565 aa
MAAAAVAVAETRKLPRPGRGGVVSLGLTEEEARVRAITEIVNNMVELSRKGKDVDLNALK
SAACRKYGLSRAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI
ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV
DKVEFILMGGTFMSLPAEYRDYFTRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIET
RPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV
AHMMPDLPNVGVERDLESFKEFFESPSFRTDGLKIYPTLVIRGTGLYELWKTGRYRNYPP
EQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR
TREAGIQDIHNKIRPEEVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTC
PELTGRCSIVRELHVYGTAVPVHGRDTDKLQHQGYGTLLMEEAERIARREHRSTKIAVIS
GVGTRHYYRKLGYELEGPYMVKNLV
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggtagcggtagcggagacccggaagctcccgcggccgggaaggggc
ggagttgtttccctcggcctgacagaagaagaagctagagttcgtgctataacggagatc
gttaacaacatggtggaactctcacggaaaggcaaggatgttgacctaaatgcgctaaag
tcagcagcgtgccgaaaatacgggctctctcgggctcctaagttggtagagatgatcgct
gctttgcctgactctgaacgtgaaacactgcttcccaaactccgagccaagcctgtccgt
acagcctctggaatagctgtcgtagctgtaatgtccaagcctcatcgttgtcctcatata
gctaccaccggaaacatttgtgtctattgccctggcggccccgattctgattttgagtac
agtacacagtcatacacgggatatgaacctactagtatgcgagctattcgagctagatac
aatccttatgtacaagctcgaagccggattgatcaacttaagagattgggtcacagtgtt
gacaaggttgaatttatcttgatgggaggtacattcatgtcattgcctgctgaataccgt
gattacttcacacggaatctccatgatgctttatccggacatacttctgccaatgttgaa
gaggctgtcgcatactctgaacatggggcgacaaagtgcattgggatgacaattgaaacg
aggccagactactgccttggacctcatctgagacaaatgctttcttacggttgtacgcgg
ctagaaattggagtacagagtacgtatgaggatgttgctcgtgacaccaatagaggccac
actgttgcagctgtggctgattgcttttgtttggcaaaagatgctggcttcaaggtggtt
gctcatatgatgccggaccttccaaatgttggcgttgaaagagacttggagagtttcaag
gaattctttgaaagtccttcatttaggactgatggacttaaaatttatcctacacttgtt
attcgtggcacaggactctatgaactgtggaaaactggaaggtatagaaattatccgcca
gagcagcttgtagacattgtagcaaggattctttctatggtgccaccctggacccgagtt
taccgggtccaacgtgatatccctatgcctctagtgacttctggagttgagaaagggaat
ctccgagaactggctttagctcgaatggatgatcttggcttgaaatgccgagatgtccga
acacgcgaagctgggatccaggacattcacaacaagataaggcctgaagaggttgagctt
gttcgccgcgattatactgcaaatgaaggatgggagactttcctttcatatgaagataca
cgccaggatattcttgttggattgctacggctgcggaagtgtggacggaatgtgacttgc
ccagaacttacgggaaggtgttcaattgttcgtgagcttcatgtgtatgggactgcagtt
cctgttcatggtcgagacacagataagctgcagcaccagggttatggcactctgctgatg
gaggaggctgagcggattgctcggagggagcataggtcgaccaaaatcgctgttatatcg
ggtgtagggacccggcattactacagaaagctaggctatgagcttgaaggtccttacatg
gtaaaaaaccttgtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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