KEGG   Solanum lycopersicum (tomato): 101247925
Entry
101247925         CDS       T02665                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03010  Ribosome
sly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    101247925
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101247925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sly03011]
    101247925
   04121 Ubiquitin system [BR:sly04121]
    101247925
Ribosome [BR:sly03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    101247925
  Archaea
    101247925
Ubiquitin system [BR:sly04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   101247925
SSDB
Motif
Pfam: Ribosomal_L40e ubiquitin Rad60-SLD CDC48_2 Ubiquitin_2 Plexin_RBD TBK1_ULD
Other DBs
NCBI-GeneID: 101247925
NCBI-ProteinID: XP_010322296
Position
6:36037876..36040931
AA seq 146 aa
MVRGGECFVSPHHYKPSPVTKPTLASDLLDTPLKKTQIFVKTLTGKTITLEVESIDTIDN
VKAKIQDKEGIPPDQQRLIFAESTLHLVLRLRSGIIEPSLMALARKYNQEKMICRKCYAR
LHPCAVNCRKKKCGHSNQLRPKKKIK
NT seq 441 nt   +upstreamnt  +downstreamnt
atggttaggggaggtgaatgtttcgtgagcccacatcactataagccctcccctgtaaca
aaacccactctagcctcggatttgcttgacactccattgaagaagacgcagatcttcgtg
aaaaccctaacagggaagactataacccttgaggttgaatccatcgatacaatcgacaat
gtcaaggctaagattcaggataaggaaggcatccctccggaccagcagcgtttgatattt
gctgagtccactctgcaccttgttctgaggcttcgcagtgggattattgaaccttctctt
atggctttggcccggaaatacaaccaggaaaagatgatttgccgcaaatgctatgcgcgt
ttgcacccttgtgctgtcaattgcaggaaaaagaagtgtggccatagcaaccagttgagg
ccaaagaagaagatcaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (67)   

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