KEGG   Solanum lycopersicum (tomato): 101248472
Entry
101248472         CDS       T02665                                 
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
  KO
K08333  phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:sly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    101248472
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sly01001]
    101248472
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101248472
Enzymes [BR:sly01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     101248472
Protein kinases [BR:sly01001]
 Serine/threonine kinases: Other
  VPS15 family
   101248472
Membrane trafficking [BR:sly04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    101248472
 Autophagy
  Autophagosome formation proteins
   PI3K complex
    101248472
SSDB
Motif
Pfam: Pkinase WD40 HEAT PK_Tyr_Ser-Thr NBCH_WD40 Cohesin_HEAT TCAD9 APH HEAT_EZ Lipoprotein_15
Other DBs
NCBI-GeneID: 101248472
NCBI-ProteinID: XP_010319242
UniProt: A0A3Q7G106
Position
4:complement(4451798..4461047)
AA seq 1552 aa
MGNKIAKTTQASAMEYYLHDLPSSYNLVLKEVVGRGRFLKSILCKHDEGLVLVKVYFKRG
DFIDLREYEHRLSKIRDIFTSLDHPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LCLIEKKWLAFQLLYAVKQSHEHGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDD
PSDFSFFFDTGGRRRCYLAPERFYEHGGEMHVSQDAPLKPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQHDPSQLLEKIPDSGIRKMILHMIQLDPESRYSAESYLQNYAGVVFP
SYFSPFLHNFYSLLNPLNSDARVLICQTSFNEILKQMMSDKPGDRNLPAVSPHSVPVSQT
RQVSDMNENLNLVKDSSSNREEIEKGSVHDRFDLLGNVNTLLRDVKQNNQCPVVKPVLED
IANTAYSQKQRQCHIQSPGEQIPVSSISFKRIHHPFLKKITMEDLTVLMSDYDNQSDTFG
MPFLPLPEEVMSCEGMVLIASLLCSCIRNVKLPFMRRGAVLLLNSCSLYIDDEDRLQRVL
PHVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVR
ICYASNISKLALTAYGFLIHSISLSEAGVLNETNPSQNSSISTSGEPVRPQSLNSDTQLG
QLRKSVAEVIQELVMGPKQTPNIRRALLQDIGNLCWFFGQRQSNDFLLPILPAFLNDRDE
QLRAVFYGQIIYVCFFVGQRSVEEYLFPYIEQALTDTTEAVIVNALDCLAILCKSGFLRK
RFLLEMIDRSFHLLCYPSQWVRRSSVTFIAASSENLGAVDSYVFLVPVIRPFLRRQPASL
ASEKALLSCLKPSISKEMYYQLVENAKSSDMLERQRKIWYNSTPQSKQWETVDLLERSSS
ELDRMKYWPGRKHDFPGYKSASDLTKPIDFTDCDDNPTKVKSVGTLIQDPSSIMDSGDRL
PSEKLQLSGFVSPQVSGMSSFIDKSADGIPLYYFKEDNKRPAGTGVAASDSSFPYTSFGF
GSSSLPWIDPVNKSFNLANSVPAPKLVSGSISIGNSSTLLRRVVHEVEDREADQTAYVSN
KFQDIGSGTSKMGSLTMEDNTAATDRTDLSSFARTSMITDSGWRPRGVLVAHLQEHRSAV
NDISISADHSFFVSASDDSTVKVWDSKKLEKDISFRSRLTYSLEGSRALCVTVLQGSAQV
VVGACDGTIHMFSVDYISRGLGNVVEKYSGIADVKKNEVGEGAVASLLNYCSDGGASKMI
LYSTQNCGLHLLDTRTNSHAWNTKVYPKEGYISSLVAGPCGNWFVSGSSRGVLTLWDLRF
CIPVNTWQYSLACPIERMSLFLPPPSTSLSVAARPLVYVAAGCNEVSLWNAENGSCHQVL
RVANNENEAENSDLPWALAKPSNKANPKQDLRRNNGSKYRVDELSDPPPRLSGIRALLPL
PGGDLLTGGTDLKIRRWDHCSPERSYCVCGPSIKGVVNDDFYETKSSFGVQIVQEAKRRP
LATRQTAKAILGAAAVDAAGCHRDCILSLASVKLNQRLLLSGSRDGAVKVWK
NT seq 4659 nt   +upstreamnt  +downstreamnt
atggggaataagatcgcaaaaacgacacaagcgtcggcaatggagtattacctccacgac
ttgccgtcttcgtataatctggtgctgaaagaagttgtaggtagaggtcgctttttgaaa
tcaattctctgcaaacacgacgaaggacttgtgcttgtaaaagtctatttcaaaagaggg
gatttcattgatttacgcgaatatgagcatcgtctctccaaaattcgtgacatattcacc
tcccttgatcatccacatgtttggcctttccagttctggcttgaaacagataaagctgct
tatttgttgaggcaatacttctttaacaatcttcatgatcgtcttagtacccgacctttc
ctctgtcttattgagaagaaatggcttgctttccagttgctttatgcagtgaagcagagt
catgagcatggagtgtgtcatggtgatatcaagtgtgagaatgtgctagtcacatcttgg
aactggctttatcttgcagattttgcgtcattcaaacccacttatattccacatgatgat
ccttctgatttctccttcttctttgataccggtggacgaagacgatgctatcttgcaccc
gagagattttatgagcatggaggtgagatgcacgtttcacaagatgctcctttgaagcca
tctatggacatctttgctgttgggtgtgttattgcggagcttttcctcgagggccagcca
ttatttgaattgtctcaactgcttgcttatcgcagaggacaacacgatcccagtcaactt
ctggaaaagattccagattcaggaatccggaagatgattcttcatatgattcaattggac
ccagagtcacgatattcagctgaaagctatctgcagaactatgcaggagttgtgttccca
agctacttctcaccattccttcataatttctattccttgttgaatccccttaattccgat
gcaagggttctgatatgccagacctcttttaatgagatccttaaacaaatgatgagtgat
aagcctggtgacaggaaccttcctgctgtgagtccacattcagttcctgtcagtcaaaca
cggcaagtgagtgatatgaacgaaaatctgaatttagtgaaggactcatcgagcaacaga
gaagagattgagaagggctcagttcatgatcgctttgatctgcttggcaacgtgaacact
ttgctcagggatgtgaaacaaaataatcagtgtcctgttgtgaaacctgtgctggaggat
atagccaatacagcatattctcagaagcaaagacagtgtcacatccaatctccaggtgaa
caaatcccagtgagctccatttctttcaagagaattcaccatccctttttaaaaaagatc
accatggaagatttgactgtgttgatgtccgactatgataatcaatcggacacttttgga
atgcctttcttaccacttcctgaagaagtaatgagctgtgaaggaatggtgctgatagcc
tcattgttgtgttcctgcatacgtaatgtcaagttgccttttatgaggagaggtgctgta
ttgctgttgaactcttgttccttgtacattgatgatgaagatcggttgcagcgagtactt
ccacatgtgatagcaatgctgtcggatccagctgcaattgttcgttgtgctgccttagag
actttatgtgatattcttcctttggttagagattttcctccaagtgatgccaaaattttt
ccagagtatattctccctatgctttccatgcttcctgatgacccagaggagagtgttagg
atttgttatgctagcaatatatcgaagcttgcactaacagcgtatggttttctgattcac
tcaataagcttgagtgaggcaggtgttctgaatgaaacaaatccatcccagaattcatca
atatcgacctcaggggaaccagtacggccacagagtctaaacagtgatacacaacttggt
caattaaggaagtcagttgctgaggttattcaagaactcgtgatgggcccaaagcaaact
ccaaacatcaggagagcactattgcaagacattggtaacctttgttggttttttgggcag
agacaaagtaatgatttcctgttgcccattctccctgcttttctaaatgatagagatgag
cagctcagggcagtattttatgggcaaatcatatacgtctgtttttttgttggacaaaga
agtgttgaagaatatcttttcccatacattgagcaggcactgactgatacaactgaggct
gtaatcgtcaatgctctagattgcttggccattctctgcaaaagtggctttctgcgcaag
cggttcctacttgaaatgatagaccgttctttccatttgttgtgctaccctagccaatgg
gtaaggaggtcatctgtcacctttattgctgccagcagtgagaacttaggagcagttgat
tcttatgtttttcttgtccccgtaataaggcccttccttcgcaggcagccagcatctcta
gcttcagagaaagctcttctctcatgtcttaagccatcaatttcaaaagaaatgtactat
cagcttgtggagaatgcaaagagttcagatatgctggagagacaaagaaagatatggtac
aattcaacacctcagtcaaagcaatgggaaactgtagatttacttgagagaagtagcagt
gagttggatcgaatgaaatactggcctgggagaaaacatgattttccgggttataaatct
gctagtgatttaactaaaccaatcgattttactgactgtgatgataatccaaccaaggtg
aaatcagtgggaaccttgatacaagatccttcaagcataatggatagcggtgatcgcctc
ccctcagaaaaattgcagctatctggctttgtgtctccacaagtcagtggtatgagcagc
tttattgataaatctgctgatggcattcctttgtactattttaaggaggataacaagaga
ccagctggcactggtgtagcagcctctgattcctcatttccatatacatcatttggattt
ggttcttcatccttgccttggattgatcctgtgaacaaatcatttaacttggctaattca
gttccagcacctaagcttgtgtcaggttcaataagcattggcaatagctccacactgttg
cgtagagttgtacatgaagtggaagacagggaagctgatcaaacagcatatgtgagtaac
aaatttcaggacattggatctggtacatctaaaatgggttccctaacaatggaagacaac
acagccgcaacagatagaactgatttgtcatcttttgccagaacatccatgattacagat
tcaggatggaggcctcgtggggttttggttgctcatctccaagagcaccgttctgctgtt
aatgatatatccatttcagcagaccacagcttttttgttagtgcatctgacgattctact
gttaaggtttgggattcgaaaaagctagagaaggatatctcattcaggtcaaggttaact
tattctttagaaggaagccgagctttatgtgttacagtgcttcaaggttctgctcaagtt
gttgttggagcatgtgatggaacaatacatatgttctcggttgattatatctcccgagga
ctcggtaatgttgtcgagaagtactctggtattgctgatgtgaagaagaatgaagtggga
gagggtgctgttgcaagccttttgaactactgttcagatggtggtgcctcaaaaatgatt
ttgtacagcactcagaattgtgggctccatctgttggacacaagaacaaattcacatgcc
tggaacaccaaagtttatcccaaagagggctatatatcatctctagttgcagggccttgt
ggaaattggtttgtatcaggttcctcaagaggtgtacttacactttgggatttgaggttt
tgcataccggtgaacacatggcaatattctcttgcctgcccaattgagagaatgtctctt
tttcttcctcctcctagtacatcattgtctgtagcagcaaggccccttgtttatgttgcc
gcagggtgtaatgaagtttctctctggaatgcagagaacgggagctgccaccaggttttg
agggtagcaaacaatgagaatgaggctgagaactccgacttaccttgggctttagcgaag
ccatcaaataaggctaatcctaaacaagatctaagaagaaataatggttcaaagtaccga
gttgatgaattgagtgatccgcctcctcgcctttctggaattcgtgctttgcttccatta
cctggtggtgatttgttaacagggggtactgacttaaaaatacgtcgctgggaccattgc
agcccggaacgaagttattgcgtttgcggaccatctataaagggggttgttaatgatgac
ttttatgagacaaaatccagctttggcgtacaaatagtgcaggaggcgaagaggcgacct
ttggccaccagacagacagcaaaggcaatcctcggagctgctgccgtcgatgcagctggg
tgtcaccgtgattgtattctctctttggcttctgtcaaattgaatcagagacttctgcta
tcaggtagcagagacggagctgttaaggtttggaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (63)   

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