KEGG   Solanum lycopersicum (tomato): 101248777
Entry
101248777         CDS       T02665                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like
  KO
K11838  ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    101248777
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sly01002]
    101248777
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101248777
Enzymes [BR:sly01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     101248777
Peptidases and inhibitors [BR:sly01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   101248777
Ubiquitin system [BR:sly04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    101248777
SSDB
Motif
Pfam: USP7_ICP0_bdg UCH USP7_C2 MATH UCH_1 ubiquitin SASP Malt_amylase_C DGCcoil
Other DBs
NCBI-GeneID: 101248777
NCBI-ProteinID: XP_004239738
Position
5:complement(65720958..65739668)
AA seq 1119 aa
MTLLTPPPVDPEDHEMLVPSSDFPTEGPLPVEVLAGAPADTTNTVDAQAVDDPASARFTW
TVEKFSRLNVKKLYSDPFNVGGFKWRILIFPKGNNADHLSMYLDVADAATLPYGWSRFAQ
FSLAVINRMNNKLTVKKDTQHQFNARESDWGFTSFMPLSELYDPGKGYLMDDTVIIEADV
AVRKVADYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDNPS
GSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYESFMQHDVQELNRVLCEKLEDKMKG
TVVEGTIQQLLEGHHMNYIECIRVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERL
EGDNKYQAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFVRDAMIKINDRYEFPLQLDL
DRENGKYLSPDADRSVRNLYSLHSVLVHSGGVHGGHYYAYIRPTLSDQWYKFDDERVTKE
DTKRALDEQYGGEEELPHTNPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICDVDEKDIA
EHLRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARDEDLGEQIGKEIYFDLVDHDKVHSFR
IQKQMPFAQFKEEVAKEFGIPVQFQRYWLWAKRQNHTYRPNRPLTAQEELQSVGQLREVS
NKANHAELKLFLEVEFGLDLQPLPPLEKTKDDILLFFKLYDPSKEEIRYVGRIFVKGSGK
PLEILAKLNELAGFLPDEEIELFEEIKFEPNVMCEHINMNLSFRGCQLEDGDIICFQKSL
RKQGNEQYRFPEVPSFLEYVHNRQIVRFRSLEKPKEDEFSLELSKQNNYDEVVECLARHL
RLDDPSRVRLTPHNCYSQQPKPQPIRYRGVDRLTEMLSHYNQTSDVLYYEVLDIPLPELQ
GLKTLKVTFHHSAKDEVTIHTIRLPKQSTIADVLNDLKTKVELSRPDAELRLLEVFYHKI
YKIFPLNERIENINDQYWTLRAEEIPEEEKNLGAHSRLIHVYHFIKEATQNQTQVLNFGE
PFFLVIHEGETLTEVKARIQKKLQVPDEEFSKWKFAFLSMGRPEYLEESDIIFNRFQKRD
VYGAWEQYLGLEHTDCPPKRSYSAHQNRHNFEKPVRIYN
NT seq 3360 nt   +upstreamnt  +downstreamnt
atgactctgctcacgcctcctccggtagatccagaagaccacgaaatgcttgttcctagt
tctgactttcctaccgagggacccctgcctgtggaagttttggcaggtgcaccagcagac
acaacaaatacggttgatgcacaagcggtggatgatccggcatcagcccggttcacatgg
actgtcgaaaaattttcgaggttgaatgtgaagaagttgtactctgatccttttaacgta
ggaggatttaaatggaggattctgatattcccaaaagggaacaatgcagaccatttgtca
atgtatttagatgtggcggatgctgcaacattgccttatggttggagtagatttgctcag
tttagcttagctgttatcaaccgaatgaataacaagttaacagtaaagaaagatactcag
caccagtttaatgcaagggagagtgactggggtttcacatcattcatgcctcttagtgaa
ctatatgatcctgggaaaggttatcttatggatgataccgtcataattgaagctgatgtt
gctgtccgtaaagtcgctgattactggtcccatgactctaaaaaagagactggttatgtt
ggccttaagaatcagggagccacttgttatatgaactctctcctccagacactataccat
attccttattttagaaaggctgtgtatcacatgccaacaactgagaatgacaatccatct
ggcagcatccctttagctttgcagagtttgttttataagctccagtataacgacactagt
gtagcaacaaaagaattaacaaagtcctttgggtgggacacctatgagtctttcatgcag
catgatgtacaagaacttaacagggttctttgtgaaaagctcgaagataagatgaaggga
actgttgtagagggcacaatacaacaattacttgaggggcatcatatgaattacattgaa
tgtatccgtgtggactacaaatcaacaagaaaagaatctttttatgatcttcagcttgat
gtgaaagggtgtcgtgatgtatatgcttcatttgacaagtatgttgaagtggaacgcctc
gagggcgacaacaaataccaagcagaacaacatggtttacaggatgctcggaaaggtgtc
cttttcattgacttccctcctgttcttcaacttcagttaaaacgctttgaatacgatttt
gtgcgggatgctatgatcaagataaatgatcgatatgagttcccattgcaactcgatctt
gatagagagaatggaaaatatttatctccagatgctgatcgaagtgtccgcaatctctat
tctctgcacagtgttttagttcacagcggtggggtgcacgggggacactattacgcatat
atcaggcctacactgtctgatcagtggtataaatttgatgatgagcgtgtgacaaaagaa
gatacaaagagagcactggatgaacaatacggtggtgaggaagagttaccccacacaaat
cctgggttcaataattcaccatttaaatttacaaaatattcaaatgcgtatatgcttgtc
tatatacgtgaaagtgacaaggaaaagatcatatgcgatgtggatgagaaggacatagcc
gagcatctcaggataagactaaagaaggagcaagaagaaaaagaacaaaagagaaaggag
aaagcagaggctcacctctatacaatcattaaggtagctcgtgatgaagaccttggtgaa
caaattggaaaggagatctattttgatcttgtggatcatgataaagtgcatagttttcgt
attcagaagcagatgccatttgctcaattcaaggaggaagttgctaaggaatttggcata
ccagttcaatttcaacgttactggctatgggcaaagcgccagaaccatacgtatcggcct
aatcggccattgacagctcaagaggaacttcaatctgtgggccaactgagggaggtttca
aataaagcgaatcatgctgagctaaaattgttcttggaagtagaatttggcctggatttg
caacctcttcctccactagagaagaccaaggatgatatccttctctttttcaaactctat
gacccttcgaaagaggagataaggtatgttggacggatttttgtaaaaggaagtggcaag
ccgctggagatacttgcaaagctaaatgagttggctggctttttgcctgatgaagaaatt
gaactttttgaggaaataaaatttgaaccaaatgtgatgtgtgaacacattaacatgaat
ctgagttttcgtggctgtcagctagaagatggggacattatttgttttcagaaatccctt
cggaagcaagggaatgaacaatatcgctttccagaggttccttcatttttggagtacgtg
cacaatcgccagattgttcgttttcgctcattggagaaacccaaggaggacgagttcagt
cttgagttgtcaaagcaaaacaactatgatgaagttgttgaatgcttagctcgccatctt
cgcttggatgatccatcaagagtaaggcttacaccacataactgctactcacaacagcca
aaacctcagccaataaggtatcgtggagttgatcgtctcacagaaatgcttagtcactat
aatcagacttcagatgttttgtattatgaagtcctggatattcctttaccagaacttcag
ggcttaaaaactctcaaagttacttttcatcattctgccaaggatgaagtgactatccat
actatcagattgccaaaacaaagtaccatagcagatgttcttaatgatctgaaaacgaag
gttgaattgtcacggccggatgctgaactaagattgcttgaagttttttaccacaagata
tataagattttcccccttaatgaaaggattgaaaacataaatgatcaatactggacgcta
cgtgcagaggagattcctgaagaggagaaaaacctgggtgctcatagtcgcttaattcat
gtttatcattttataaaggaggcgactcaaaatcaaacacaagttttgaactttggtgag
ccctttttcctagttattcatgagggtgagacattgactgaggttaaagctcgcattcag
aaaaaattgcaggttccagatgaagagttttcgaagtggaaatttgcatttttgtccatg
ggtcgtcccgagtacctggaggaatcggatatcattttcaaccgttttcagaaaagagat
gtgtatggtgcttgggagcagtaccttggattagagcacactgactgtcctccaaaacga
tcatattctgcccaccagaaccgtcacaattttgagaagcctgttcggatctacaactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (52)   

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