KEGG   Solanum lycopersicum (tomato): 101249682
Entry
101249682         CDS       T02665                                 
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101249682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    101249682
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101249682
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     101249682
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40
Other DBs
NCBI-GeneID: 101249682
NCBI-ProteinID: XP_004248289
Position
10:703241..715222
AA seq 1418 aa
MASAGNPNQSGGTPSDMHTFFKPSTLVSTNPNTQNPINPNLIPSPFPLASASYPPASAGG
AGGGTGGSAGGLYYPTQTTPFHLIPQFNHNIPLQYNNHQPQHDGHMHPQRSMSFPAPPLQ
PPPTPTSPHQFLNPGNNPNPNPGARLMALLSPPSSTHEVLQQPTVQLPPLQPTTSGSELS
DFSASPNVGIAHSGSSPLRMPSRKLPKGRHLNGDHVVYDIDDRLPGEVQPQLEVTPITKY
GSDPGLVLGRQIAVNKSYICYGLKLGAIRVLNINTALRSLLKGLAQRVTDMAFFAEDVHL
LASASVDGRVYIWKITEGPDEEDKPQITGRIVTAIQIVGEGESLHPRVCWHCHKQEILVV
GIGRHVLKIDTTKFGKAEVFSADEPLKCPVDRLVDGVQLVGAHDGEVTDLSMCQWMTTRL
VSASVDGTIKIWEDWKPQPIAILRPHDGNPIHSATFLSAPDCPHHIILITGGLLNREMKI
WVSASESWHCIQTLELKSSAEARAEETFFNQVVALSQAGLLLLANAKKNAIYAVHLEYGL
NPMATHMDYIAEFTVTMPILSFTGTSDLQPHGEQIVQVYCVQTQAIQQYALDLSQCLPPP
MENGVGFERTESNVSRDAANIEGYVPVDPPGSKQMDFPLTSSAPKTLVNESATEIEATAR
PLMTDARTALATSAEFASSIAESKSSSLPSITTDTDIAPFTSPPPLSPELARKLSGFRSI
SNSSKHGPSVNDHFGDPKAVEYSVDRQMDAIHPNLTGLTLSDGDPMKNEDEVSGDDGSSG
ISSTIKFKHPTHLVTPSEILMANSSSEVNHVNEHKSEGQSSIQDVVINKEARNVEAEVKN
VGETRFNQKTDVGSQQELHTFVSDNKEKPFCSQASDLGIEMARECRDLSPETYIVEESRQ
FDGVSGTEQLIQASTAPKEDRDSAKETSGNNLDSNVQVSAHQPPASSAKGKKQKAKNTQG
FEPASPSPGSFKSSDSNEGGISSSNTSMEAAVSQILSMREKLNQVLNMQKETQKQMSVMV
AAPVTKEGRRLEAALGQSMEKAVKANYDALWARYHEDSAKQEKLLRDRTQQITNLISNCF
NKDMPGLIEKIMKKELAAVGQAVTRSIVPIIEKTVSTAISESFQKGVSDKAVNQLEKTVS
SKLEASVARQIQAQFQTSGKQALQETLKSIMEGSVIPGFEMSCKAMFEQVDLTFQKGFAE
HTGSALQQFESMHSPLVHALRDAINSASSMTQTLSGELADGQKKLLTLAVSGANSKLSNP
LVSHMSNGPLLHEKLEAPVDPIKELSRLLAERKYEEAFTTALHRTDVSIVSWLCLQVDLS
GILSMNPLPLSQGVLLSLLQQVACDITNETSRKLSWMRDVVSAINPTDPVIVLHVRPIFE
QVYQILNHHRTLPTTTPAELSSIRLIMHVINSMLHVPC
NT seq 4257 nt   +upstreamnt  +downstreamnt
atggcttccgccggaaatccaaaccagtccggtggaacaccgtctgatatgcatactttc
ttcaagccttcaactctggtttcaacaaacccgaatacccagaaccccattaacccgaat
ttgataccttcaccatttccgcttgcttcagcttcttatcctccggctagtgccggcggc
gccggtggtggtacaggaggaagtgccggaggactttactacccaacccagacaacccct
tttcaccttattcctcaattcaatcacaatattcctctacagtataacaaccatcaacct
caacatgatggacatatgcatccgcaaagatctatgtctttccctgctccaccacttcaa
ccaccaccaacccctactagtcctcaccagttcttgaatcctggaaataacccgaatcct
aaccctggggctcgacttatggctttgttaagtccgccatcttcaactcatgaagttctt
cagcaacccactgtgcaacttcctcctttacagcctacaacttctgggtctgagctttct
gatttttctgcttcaccaaatgttggtattgcacattcagggagtagcccgttgcgaatg
ccgagtaggaagttacctaaagggagacatttgaatggggatcatgttgtttatgatata
gatgataggttgcctggtgaagtgcagcctcagctggaggttactcccattaccaagtat
ggttcggatccgggacttgttttaggcaggcaaattgcagttaacaaaagctatatatgt
tatgggctcaaattgggagctattcgtgtgcttaacattaacaccgcgttgaggtcattg
cttaaaggtcttgcacagagggtcacagacatggctttctttgctgaggatgttcacctt
ttggctagtgcaagtgtcgatgggcgtgtttatatatggaaaattactgaagggccagat
gaggaagataagccccaaattacagggaggattgtcactgctattcaaatagttggtgag
ggggaatctcttcatccccgagtttgttggcattgtcacaaacaagaaattcttgtggtc
gggatcggaagacatgttttaaaaattgataccacaaaatttggaaaagctgaagttttt
tcagcagatgaacctctcaagtgtcctgttgacaggttggttgatggggtacaacttgtt
ggtgctcatgatggagaagtgactgatttgtcaatgtgccagtggatgaccactcgattg
gtatctgcatcggtggatggcacgataaagatttgggaagactggaagcctcagccaatt
gcaattctcaggcctcatgatggtaatcctattcattcagccaccttcctttctgctcca
gactgcccacatcacatcatactcatcactgggggtttacttaatcgggaaatgaagata
tgggtatcagcaagtgagtcatggcactgtatacaaactttggaattgaagagttctgct
gaagctcgtgctgaagagacattttttaaccaagttgtagcgttgtctcaagcaggtctg
ctcttattagcgaatgcgaaaaagaatgccatatatgctgttcatctagagtatggcctg
aacccaatggcaacccatatggattacatagctgaatttacagttacaatgccaattttg
agtttcactggaacaagtgatttacagcctcatggtgaacagattgttcaggtgtactgt
gtacagacgcaggctattcagcagtacgctttggacctatcccaatgcttgcctcctccc
atggagaatggtgtgggcttcgaaaggacagaatctaatgtatcacgtgatgctgctaat
attgaaggatatgttcctgttgatcctcctggtagtaaacaaatggatttccctttaact
agttctgcacccaaaactttagtgaatgagagtgccacagagattgaagctacagctaga
cctcttatgactgatgcacgcactgcattggccacctctgcggaatttgcttcttctatt
gcggaatctaaatcatctagtttacccagtataactactgatactgatattgctcccttt
acatcaccaccacctttgagtcctgagttggctagaaaactttctggtttcagaagcata
tcaaacagctctaagcatggtccctctgtcaatgaccattttggggatcctaaagctgtt
gaatattcagttgacaggcaaatggatgccattcatccaaacttgactggccttactctg
tcagatggtgacccaatgaaaaatgaagatgaagtgtccggtgatgatggttcttcgggt
attagtagtacaattaaattcaagcaccctactcatttggtgactccttcagagatactg
atggctaactcatcttctgaggtaaaccatgttaatgaacataagagcgagggacaatca
agtatccaggatgttgtaatcaacaaggaagcccgcaatgtggaagcggaggttaagaat
gttggtgaaacaagattcaatcaaaaaactgatgttggctctcaacaagaacttcatact
tttgtgtctgataacaaggagaaacccttctgctctcaggcatctgaccttggaatagaa
atggctcgagaatgtcgtgacttatcgcctgaaacttatattgtcgaggaatctaggcag
tttgatggggtttctggaactgagcagctgatccaagcatcaactgcccctaaagaagac
cgtgactctgcaaaggagacctctggaaataatttagactcaaatgtgcaagtttctgct
catcaacctccagcttctagtgccaaagggaaaaagcaaaaggcaaagaacactcaagga
tttgaaccagcttcaccctcacctggttctttcaagtcatctgattccaatgagggtggt
attagctcaagtaacacctctatggaagctgcagtctcacaaattttgtctatgcgtgag
aagctaaatcaggttcttaatatgcaaaaagaaacgcaaaagcagatgagtgtgatggtt
gctgccccagttaccaaagaaggaagaagacttgaggctgccttgggacagagcatggag
aaggctgtcaaggccaattatgatgctttatgggcccgttaccacgaagatagtgctaaa
caagagaaattacttcgtgatcgtactcaacaaataaccaatttgatatctaactgcttt
aacaaggacatgcctgggctaattgagaaaataatgaagaaagaactggcagctgttgga
caagccgtcacacgcagtattgtccctatcattgagaaaactgtatcaactgctatttca
gaatccttccagaaaggagttagtgacaaggcagtaaaccaactggagaaaacagttagc
tctaaacttgaagcttctgttgctaggcaaattcaagcacaattccagacctctggcaag
caagctcttcaggaaactttgaaatctataatggaaggttcggtgattcccggctttgag
atgtcatgcaaggcaatgtttgagcaagtagatttgacgtttcaaaaaggatttgctgaa
cacactggttccgctctacagcaatttgagtccatgcattcaccgttagtacatgcttta
agggatgccattaattctgcatcatcgatgactcaaacattgagtggagagctagctgat
ggtcaaaagaagttgcttacacttgcagtttcaggagcaaattccaagttatcgaatcca
ctggttagccacatgagtaatggaccattactgcatgagaagcttgaagctcctgttgat
ccaatcaaagagttatcaagattgttggcggagcgcaagtacgaggaggcattcactaca
gccttgcacagaactgatgtgtctattgtatcatggttatgtttgcaggttgatctgtcg
ggtatcttgtcaatgaatcctctcccgttgagtcaaggtgtacttctttcacttcttcag
caggtggcgtgtgatattaccaatgagacatctcgaaaattatcctggatgagggatgtg
gtatcagccataaatccaactgacccggtgattgtactgcacgtacggcctattttcgag
caagtatatcaaatactaaaccatcatcggactctacctaccacaacccccgcggaactt
tcaagcattcgccttataatgcatgttatcaactctatgctccatgttccatgctaa

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