KEGG   Solanum lycopersicum (tomato): 101250720
Entry
101250720         CDS       T02665                                 
Symbol
ccs52A
Name
(RefSeq) protein FIZZY-RELATED 2
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101250720 (ccs52A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101250720 (ccs52A)
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   APC/C
    Target recognizing subunit
     101250720 (ccs52A)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 Nup160 Peptidase_M10_C
Other DBs
NCBI-GeneID: 101250720
NCBI-ProteinID: NP_001304999
UniProt: A0A3Q7IPR3
Position
8:63529036..63533254
AA seq 481 aa
MENSSVNPQNPISSSSDLNPKTPSRTNQLIPGFNSYHPSPSRTIYSDRFIPSRSSSNFAL
FDLPLPPQSSSSEDSTNAYTALLRSALFGADCGSVVPPVTPDKSLGLNARNLQICRPNCN
IFRYKTETRQSLQSLSPFGFEDQLPGFSPSPVKANRKVPRSPFKVLDAPALQDDFYLNLV
DWSSHNVLAVGLGSCVYLWHASSSKVVKLCDLGIDDSVSSVGWAQRGTHLAVGTSNGKVQ
LWDSSRCKRIRTMEGHRLRVGALAWSSSMLSSGSRDKSILQRDIRAQEDFVSKLSGHKSE
VCGLKWSYDNRELASGGNDNRLFVWNNHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGG
GTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK
IATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSKNTETEIGASSFGRTQI
R
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggaaaattcttctgtaaatcctcaaaatccaatttcttcatcatctgatctaaatccc
aaaaccccatcaagaacaaatcagttaattccgggtttcaattcatatcatccttcacct
tctagaacaatctacagtgatcgtttcattccgagtagatcttcgtctaattttgctctt
tttgaccttcctttacctccacaatcatcttcatctgaggattccaccaatgcctatact
gcactacttcgttcagctctgtttggagctgattgtggatcggtggtgccgccggtgaca
ccggataagtcgttgggtttaaatgcaagaaatttacagatttgtagacccaattgtaat
atttttcggtataagacggagacccggcaatcattgcagtcattgtcgccgtttgggttt
gaggatcagcttccgggttttagtcctagcccggttaaagctaaccggaaagttccaaga
tcgccttttaaggtgttggatgcgccggcattgcaagatgatttttacttgaacctcgtg
gactggtcgtcgcataatgtgttagctgtggggctagggagctgtgtttatctatggcat
gcatctagtagcaaggtagtgaagttgtgtgacctaggaattgatgatagtgttagttca
gttggttgggcacaacggggcacgcatctagctgttggaacaagtaatggcaaagtccag
ttatgggattcctcgcgctgtaagaggataagaaccatggagggtcatcgattacgagtt
ggcgcacttgcgtggagctcatccatgctgtcttcaggaagccgagacaagagtattctt
cagcgtgatatacgtgctcaagaagattttgtcagtaagctgagtggtcataaatcagag
gtttgtgggctcaaatggtcttatgataaccgtgaattagcttcaggtggaaatgataat
cggctttttgtatggaacaaccattcaacacaacctgtgctgaaatactgtgagcatact
gctgcggttaaggccattgcatggtccccccatctccatgggcttctagcatccggtgga
ggcacagctgatcgatgcattagattctggaacaccaccactaatacacatctcagttgc
atggacactggcagtcaggtctgtaatcttgtgtggtcgaagaatgtcaatgaattagtc
agcacacatggttactctcaaaatcagataatagtttggagatatccgacaatgtctaag
atagctactctgacaggtcatacatatagagtcttatatcttgctatatctccagatgga
cagacaattgtcactggagcaggagatgaaacacttcgattctggaatgttttcccttct
cccaagtcaaagaacaccgagactgaaattggtgcatcttcgtttggtagaactcagatc
aggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

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