KEGG   Solanum lycopersicum (tomato): 101254684
Entry
101254684         CDS       T02665                                 
Name
(RefSeq) LOW QUALITY PROTEIN: AMSH-like ubiquitin thioesterase 2
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101254684
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sly01002]
    101254684
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101254684
   04121 Ubiquitin system [BR:sly04121]
    101254684
Enzymes [BR:sly01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     101254684
Peptidases and inhibitors [BR:sly01002]
 Metallo peptidases
  Family M67
   101254684
Membrane trafficking [BR:sly04131]
 Endosome - Lysosome transport
  Others
   Others
    101254684
Ubiquitin system [BR:sly04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    101254684
SSDB
Motif
Pfam: JAB Prok-JAB
Other DBs
NCBI-GeneID: 101254684
NCBI-ProteinID: XP_010319626
Position
4:24040184..24073658
AA seq 166 aa
MENFLEIASNNTKKDIETCGVLGAIIKDDTFYTTSLIIPKQESTSNTCQALQEEKIFAIL
NGQSLFPIGWIHTHPSQSCFMSSIDLHTQYSYQAMIPEAIGIVMAPTDTSRACEIFRLSD
GGKKILKDCPEKGFHPHKEPVDRSPLYXDCSNGYINSCLRLEIFYL
NT seq 501 nt   +upstreamnt  +downstreamnt
atggagaattttctggaaatcgccagcaacaacactaagaaggatatagagacttgtgga
gttcttggtgccatcattaaagatgacacgttttatactacctctctaataataccaaaa
caagaatcaacctccaatacttgtcaagccctacaagaggagaaaatatttgccatacta
aatggacaatccctctttccaatcggatggattcatacacatccatctcagagctgtttc
atgtcatctattgatttgcacactcaatattcgtatcaggcaatgatacctgaggctatt
ggaattgtcatggctcctaccgatacatcaagggcatgcgaaatatttcggctatctgat
ggtggaaagaaaatcctcaaggactgcccagagaaaggatttcatcctcataaagaacca
gttgatcggagtcccctctatngggattgctccaatggctatattaattcatgtctaaga
ctagagatattttatttgtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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