KEGG   Solanum lycopersicum (tomato): 101255875
Entry
101255875         CDS       T02665                                 
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101255875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sly03400]
    101255875
Enzymes [BR:sly01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     101255875
DNA repair and recombination proteins [BR:sly03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     101255875
SSDB
Motif
Pfam: Exo_endo_phos SAP SAP_new25
Other DBs
NCBI-GeneID: 101255875
NCBI-ProteinID: XP_004236570
UniProt: A0A3Q7G0S5
Position
4:complement(7356026..7364129)
AA seq 539 aa
MLQSFKFGLYNFITSNSVGVISRIPKFQVLVSVNLTIMGSKKRPFSTSSATGKSNEQVSV
AAEKGVSKENVGKSGEILVEDMGTVEKMTVPQLRVKLRSLGIPSRGTKQELVASLKTFLD
SKLDDAGNGSVAQEDKVSSEESLEVAANPSKKKSRKLPSKNRNQSNVTSEVPTTRQTKRR
VTKGQTEDTSFDIIVKQTEITQEMSIESNDIKGKKNVRAKRKVSSATVSAHIGVSEAADL
SVNQDEPWTIFAHKKPKDGWIVYNPKTMRPPPLSKDTKHVKLLSWNVNGLRALLKLKNLC
IQQLADREDFDVICLQETKLQEKDVEAIKESLHDYKNSFWTCSVSKLGYSGTAIISRIKP
VSIKYGLGIPDHDTEGRLVTVEFDNFYLLCGYVPNSGDGLRRLTYRITEWDPSLGSYMKE
LEESKPVVLTGDLNCAHEEIDIYNPTGNKRSAGFTEEERQSFETNFLNKGFVDTFRKQHP
GVVGYTYWGYRHGGRKTNKGWRLDYFLVSECISEKVHDSYILPDVDGSDHSPIGLVLKL
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgttacaatcttttaagtttggtctttacaatttcatcacttccaatagtgttggagtc
atttcaaggatacccaagtttcaggttttggtttctgtgaatttgacaataatggggtct
aaaaaaagacccttttcaacctcatcagctactggaaaatcaaatgaacaagtgagtgtt
gcagctgaaaagggtgtttcaaaggaaaatgttggcaagagtggggagattcttgtggag
gatatgggaacagtagagaaaatgactgttcctcagctcagagtaaaacttaggagtctt
gggattccttccagaggtactaagcaagaacttgttgcttctttgaagactttcctcgac
agcaaacttgatgatgcaggcaatggatctgtggcacaggaggataaagtatcatctgag
gagagtctagaagtagcagctaacccttcaaaaaagaagtccagaaaattgccaagtaag
aatcgcaaccaaagcaacgtcacatctgaggttcctactactcggcagacgaaaagacga
gtcacaaaaggccagactgaggataccagttttgacattattgttaaacaaactgaaatt
acccaagaaatgtccattgaatctaatgatatcaaaggcaagaaaaatgtacgagcaaag
agaaaagtttcatcggcgactgtttcagcacacataggagtttctgaggctgctgatctt
tctgtaaatcaagatgaaccttggactattttcgctcacaagaagcccaaagatgggtgg
attgtatacaatcctaaaacaatgaggccacctcctctttcaaaggatactaaacatgtt
aagttattgtcttggaatgtcaatggtctgagggctctattaaagttgaagaatctttgc
atacagcagcttgctgatagagaagattttgatgtaatatgcctacaggagactaaacta
caggaaaaagacgttgaagcgatcaaggaaagtctccatgactataagaatagcttttgg
acatgcagtgtctctaagcttggatattctggtactgcaatcatctcacgaattaaacca
gtttctatcaaatatggtctcggtataccagatcatgatactgaaggacgacttgttacg
gtggaatttgataacttctatttgttgtgtggatatgttccaaattctggtgatggacta
cgccgattgacatacagaattacagagtgggatccttctcttggcagttacatgaaagag
ctagaggagtcgaaacctgttgttttgaccggtgatctaaattgtgcccacgaggagata
gatatttataatcctactggaaataaaagaagtgcaggctttactgaagaagaaagacag
tctttcgaaacgaactttctaaacaaggggtttgtagatacattcaggaagcagcatcct
ggtgtcgttggttatacttattggggttaccgccatggtggacgtaaaactaataaagga
tggcggcttgactacttccttgtctcggaatgcatttctgagaaggtgcatgactcgtac
attctgccagatgtagatggcagtgatcacagtcccattggccttgtcctgaagctgtag

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