KEGG   Solanum lycopersicum (tomato): 101256079Help
Entry
101256079         CDS       T02665                                 

Definition
histone deacetylase 5
Orthology
K11407  
histone deacetylase 6 [EC:3.5.1.98]
Organism
sly  Solanum lycopersicum (tomato)
Brite
Enzymes [BR:sly01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101256079
Protein phosphatases and associated proteins [BR:sly01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101256079
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     101256079
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
3
AA seq 650 aa AA seqDB search
MDSGERRRVGLIYDKRMKKHFDLEEVKHPESADRIQKIWNKLKDSGIAKRCTVMGGKEAK
DEHISLVHNRKHIDFIKSISSKEEMFWKEMAKKYNSVYFNQGSSEAAYISAGCVIEVAEK
VAEGELDSAFAIVRPPGHHAEPNQPMGFCLFNNVAIATKYLLDKRADLGIKKILIVDWDV
HHGNGTQKMFWKDPRVLFFSVHRHDFGTYYPCDEAGSHKMTGEGAGKGYNINVPWEHGGC
GDADYLAVWDHVLIPVAKEFGPDIILISAGFDAAIGDPLGGCCVSPHGYAVMLNKLLEFA
GGKIVMALEGGYDKVSIANSVQACMEVLLKQKPIIGSSEAYPFESSWRVIRAVRKTLSPF
WQSLSERLPVKITSMSSPYIQVVSSDSEDEYNTFSNRVSQHLEMDIENVIQPFSDLKVND
DTGITSQASNNSHTWREELSKIDIWYATFGSNMKLSRFLCYIEGGQVEGMRKPCIGSLDK
SKPKEIKWESFPHRLFFAREHTATWGPGGVAFLHPECNSDEKAYLCLYRITLEQFNDVLL
QENTSSFDMNYPLFDMTDLQSIEERKCVPVEAVKNGWYHNVLYLGKENGIPILTMTCQLS
DVDNFKSGKVGMCKPSKEYANTLIRGLVEGKQLSEEEATTYIQEAASRAL
NT seq 1953 nt NT seq  +upstreamnt  +downstreamnt
atggattccggtgaacgacggcgcgttggactgatatacgataaaagaatgaaaaagcat
tttgatctagaagaagtgaaacatccggagagtgcagatcgtattcagaaaatctggaac
aagcttaaggattcaggaatcgctaagagatgtactgttatgggtggaaaggaagccaag
gatgaacatatatctttggttcataacagaaaacatatagatttcatcaaaagcattagc
tcaaaagaagagatgttctggaaagagatggctaagaagtacaattcggtatacttcaat
caaggctcttcagaagcagcttacatttctgcaggctgtgtgattgaggttgctgagaaa
gttgctgaaggagaactagactctgcctttgccattgtcaggcctcctggtcatcacgca
gaaccaaatcaaccaatgggattttgcttatttaacaatgttgctatagctacaaaatat
ctcttggataaaagagctgatttggggatcaagaagatcttaatagttgattgggatgtc
catcatggaaatggcacccaaaagatgttttggaaggaccctcgagttctcttcttttct
gtgcataggcacgattttggaacttattatccttgtgatgaagctgggtcgcacaaaatg
actggtgaaggagcgggaaaaggatacaatataaatgttccttgggagcatggcggttgt
ggtgatgcagactatcttgctgtgtgggatcatgtcttgattcctgttgccaaagaattt
ggtcctgacattatcctgatctcagcaggatttgatgcagctattggtgatcctcttggt
ggatgttgtgttagtccacacggatatgctgtaatgttgaacaagttgttggaatttgcc
ggaggcaagattgtaatggcacttgaaggtggatatgataaggtctctatagcaaattct
gtgcaagcttgtatggaagtgttattaaagcaaaaaccaattattggatcttctgaggct
tatccatttgaatcctcatggcgagtgatacgggctgtacgtaaaacgttgagtccattt
tggcaatcattatcggagagattaccagtgaagatcactagcatgagctctccttacatt
caggtcgttagctctgattctgaagatgagtacaacaccttttctaacagggtatcacaa
catttggagatggatattgagaatgtaattcaaccattttcagacctgaaagttaatgat
gacacaggcataacaagtcaagctagcaataattctcacacttggagggaagagctttca
aagattgatatatggtatgccacgtttggatcaaatatgaagttatcaaggttcctttgc
tatattgaaggaggacaggtggaaggcatgcgaaagccatgtattggttctttggataaa
agcaagccaaaggagatcaaatgggaatcttttccccatcgcctattctttgctcgtgag
catacagctacctggggtccgggtggggttgcttttcttcaccctgaatgcaacagtgat
gaaaaagcttacttgtgcctatataggataacgcttgagcaatttaatgatgttttactt
caagagaatacttcaagctttgacatgaattaccctttgtttgacatgactgacttacaa
tctattgaagaaagaaaatgtgttccagtggaggctgtcaagaatggctggtaccataat
gtgctttacctgggaaaggagaatggtattcctattttgacaatgacatgccaactgtca
gatgttgataacttcaaatcaggtaaagtaggtatgtgcaaaccatctaaagaatatgcc
aacactctgattagaggtttggtagaagggaagcagttatcagaagaggaagccaccact
tacatacaagaagcagctagcagagcattgtaa

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