KEGG   Solanum lycopersicum (tomato): 101260670
Entry
101260670         CDS       T02665                                 
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU70
  KO
K10884  ATP-dependent DNA helicase 2 subunit 1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    101260670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sly03041]
    101260670
   03400 DNA repair and recombination proteins [BR:sly03400]
    101260670
Spliceosome [BR:sly03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    101260670
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     101260670
SSDB
Motif
Pfam: Ku_N Ku Ku_C SAP Helicase_dom4_arc
Other DBs
NCBI-GeneID: 101260670
NCBI-ProteinID: XP_004247997
UniProt: A0A3Q7I954
Position
9:complement(72577432..72591943)
AA seq 624 aa
MSMDLDPDEVFRDDEDDPENEFFKERDNTKEFLVYLVDASPKMFSSTCPTDDEKIATHFQ
VAVSSIAQSLRTQIINRSYDEVSICFFNTRGKKNLQDLSGVYVFNVREREDLDRPTARLI
KEFDQIEERFEKEIGSKYGIVPGSRDNSLYNALWVAQALLRKGSAKTADKRILLLTNEDD
PFGNLKGVIKVDMMRTTMQRAKDAQDLGITIELLPLSRPDDEFNVSLFYADLLGLEGDDL
AQFKALIGERFEDLNDQLRKRMFKKRRVRRLRLVIFNGLSIELNTYALIRPTNPGTITWL
DSMTNLPLKTERTFICADTGAIVQEPLKRFQSYKNENVIFSADELSEVKRVSTGHLRLLG
FKPLSCLKDYHNLKPATFVFPSDEEVVGSTCLFVALQRSMLRLKRFAVAFYGNLSHPQLV
ALVAQDEVMTPSGQVEPPGMHLIYLPYSDDIRHVEELHTDPNSVPHATDDQIKKASALVR
RIDLKDFSVWQFANPALQRHYAVLQALALDEDEMPEIKDETLPDEEGMARPGIVKALEEF
KLSVYGESYKDEDSNIEGKAEPTRKRKANAIKEYGNYEWADLADNGKLKDMTVVELKYYL
GAHDLPVSGKKEALISRILTHMGK
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgtcaatggacctcgacccagatgaagtcttccgtgatgatgaagatgaccctgaaaat
gaattcttcaaggaaagagataatactaaggagttcttggtatatcttgtggatgcttca
cctaaaatgttttcctctacttgcccaacggatgatgaaaagattgcaactcattttcaa
gttgccgtcagctcaattgcacagtctctcagaactcagattattaataggtcttatgat
gaagtttctatatgcttctttaacactcggggaaaaaagaacttgcaggacctaagtggc
gtttatgtatttaatgtccgagaaagagaggatctggacagaccaacagctaggctaatt
aaagaatttgatcaaatagaagaaagatttgaaaaagaaataggaagtaagtacggcatt
gtgcctggctctcgtgacaattctctttacaatgctctttgggttgcacaagcccttctc
cgtaaaggatctgcaaaaactgctgataaacgtattctcttgcttacaaatgaagatgat
ccttttggtaatctcaaaggtgtcataaaagtggatatgatgaggacaacgatgcagcgt
gccaaagatgctcaagatcttggtattacaattgagcttcttccactaagccggccagat
gatgagttcaacgtttcccttttttatgctgatttacttggtctggagggtgatgacctt
gctcagttcaaagctctgataggagaaaggtttgaagatctgaacgaccagcttaggaaa
cgcatgtttaagaagcgcagagttcgaagacttcgacttgtaatttttaatggattatct
atcgaacttaacacctatgctttgatccgtccaactaatccagggacaattacttggctt
gattcgatgactaatcttcctttgaagactgagagaaccttcatatgtgctgatactggt
gctatagttcaggagcctctaaaacgctttcagtcttacaaaaatgagaatgtcatcttt
tctgcggatgagctttcagaagtcaaaagagtttcaactggacatcttcgtctgttgggc
ttcaagcctttgagctgcttaaaagactatcataacctgaagccagcaacttttgtcttt
cccagtgatgaggaagtggttggaagcacttgtcttttcgttgctctccaaagatcaatg
ttgcggcttaagcgttttgcagttgctttctatgggaatttaagtcatcctcaattggtt
gctcttgttgcacaagatgaagtaatgactcctagtggtcaagtcgagccaccagggatg
catctgatttatcttccatattctgatgatatcagacatgttgaagagcttcatactgat
cctaattccgtgcctcatgccactgatgaccagataaagaaggcctccgctttagtgaga
cgtattgacctcaaagatttttctgtgtggcaatttgctaatcctgcattgcagagacat
tatgcagtattacaagctcttgcacttgatgaagatgagatgcctgaaattaaagacgag
actcttccagatgaagaaggaatggctaggcctggtattgtcaaagcattggaggaattc
aagctctctgtttatggagagagctataaggatgaagactcaaacattgaaggaaaagct
gagccaactaggaaacggaaagcaaatgctataaaagaatatggtaattatgagtgggct
gaccttgcagataatgggaagttgaaggacatgacagttgtagaattgaagtattatcta
ggtgcacatgaccttccagtcagtggaaagaaagaagccttgattagtaggatcttaact
cacatgggcaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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