KEGG   Solanum lycopersicum (tomato): 101261973
Entry
101261973         CDS       T02665                                 
Name
(RefSeq) ras-related protein RHN1 isoform X1
  KO
K07889  Ras-related protein Rab-5C
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04144  Endocytosis
sly04145  Phagosome
sly04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101261973
   04145 Phagosome
    101261973
   04148 Efferocytosis
    101261973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101261973
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sly04147]
    101261973
   04031 GTP-binding proteins [BR:sly04031]
    101261973
Membrane trafficking [BR:sly04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    101261973
 Endosome - Lysosome transport
    101261973
Exosome [BR:sly04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101261973
  Exosomal proteins of other body fluids (saliva and urine)
   101261973
  Exosomal proteins of colorectal cancer cells
   101261973
  Exosomal proteins of bladder cancer cells
   101261973
GTP-binding proteins [BR:sly04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    101261973
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase TsaE ATPase AAA_24
Other DBs
NCBI-GeneID: 101261973
NCBI-ProteinID: XP_010315724
UniProt: A0A3Q7EXP9
Position
2:complement(31267825..31273517)
AA seq 200 aa
MAATAHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNSTVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTDSFARAKKWVQELQKQGNPIMVMAL
AGNKADLEDKRKVTAEEAHLYAEENGLFFMETSAKTAVNVNDIFYEIAKRLPRAQPAQNQ
AGMVLVDRRAEGSRTSSCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcggcaactgctcacaataatctcaatgcaaaactcgtgttgttgggggacatggga
gctggtaaatcaagcttggttatacgattcgtcaagggacaattccttgaattccaagaa
tcgacgatcggagcggctttcttttcctctactgtttcggttaacaattctacggtgaag
tttgagatctgggatactgctggtcaggagaggtaccatagcttagcgcctatgtattac
aggggtgctgcagcagctattatcgtctatgacatcaccagcactgattcatttgcacgg
gcaaagaaatgggtgcaagaattgcagaagcaaggtaatccgattatggtaatggctctt
gctggcaataaggctgatctagaagataagaggaaggtgactgcagaagaagcacacttg
tacgctgaggaaaatggcctatttttcatggaaacctctgccaaaactgctgttaatgtc
aacgatatattttacgaaatcgctaaacgattgcctagagctcagcctgctcaaaatcag
gcaggaatggtacttgttgacagaagagcagaaggatcgcgaacttcatcatgctgcagt
taa

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