KEGG   Solanum lycopersicum (tomato): 101267505
Entry
101267505         CDS       T02665                                 
Symbol
TPG6
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly00040  Pentose and glucuronate interconversions
sly01100  Metabolic pathways
Module
sly_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:sly00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    101267505 (TPG6)
Enzymes [BR:sly01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     101267505 (TPG6)
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 101267505
NCBI-ProteinID: NP_001307818
UniProt: O22610
Position
12:66506462..66508363
AA seq 395 aa
MKINNPFSSILLISFFSIFFTKSIADVMFLNVINFGAKSDNKTDSSYAFLSAWDLACNSS
KSSTIYVPKGIFLVKQAYFKGKCNNNPIIFRIDGSIVAPFDYNVIGNEKNWILFQGVDGV
SIVGGNLDGQGSSLWTCKSSTKNCPRGATTLGFSNSNNVSITGLTSLNSQMFHIVINGCK
NVKLQGVKVYAPGESPNTDGIHVQLSSDISILNSIISTGDDCVSIGPGTSNLWIQNVACG
PGHGISIGSLAKDFEEAGVQNVTVKSVMFMNTQNGVRIKTWGRPSTGFVNNVLFQHVAMI
DVENPIVIDQNYCPYNKNCPGQVSGVKVSDVTYQDIHGSSATRVAMKFDCSKRNPCKGIK
LEDVNLSYKNEPAAEASCSNVAGTTTGVIQPTSCL
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgaaaattaacaaccccttttcttcaattcttctaatttcatttttttcaatttttttc
actaaatctatagctgatgttatgtttttaaatgttataaactttggtgcaaaatcagat
aacaaaactgactcatcatatgcatttttatctgcttgggacttagcttgtaactcttca
aaatcatcaacaatttatgtaccaaaagggatttttttagttaaacaagcatattttaaa
ggaaaatgcaacaataatcccataatttttcgtatcgatggttcaatcgtagcgcctttc
gattataatgtgattggaaatgaaaaaaattggattttatttcaaggtgttgatggtgtt
tcaattgttggtggtaatcttgatggtcaaggatctagtttatggacttgcaaaagttct
accaagaactgccctagaggggctacgactctgggattttctaactctaacaatgtatcg
ataacggggttaacttcattgaacagccaaatgtttcatattgtcatcaatggttgcaaa
aatgtgaagttgcagggtgttaaggtttatgccccgggtgaaagccccaacactgatgga
attcatgttcaattatcgtctgatatctcaatattgaactcaataatcagtactggagat
gattgcgtatccattggtccaggaactagtaatttgtggatccaaaatgtcgcgtgtggc
cctggccatggaattagcattggaagcttagcgaaggattttgaagaggcaggggtgcaa
aatgtgacagtaaaatcagttatgtttatgaacacacaaaatggtgtgaggatcaaaaca
tggggaagaccaagtactggatttgtcaacaatgtactgttccagcacgttgcgatgatt
gatgttgaaaatccaattgttatcgatcaaaattactgtccgtataacaagaattgtcca
ggacaagtctcgggcgtgaaagtaagtgatgttacgtatcaagatatacatggtagctca
gcaacacgagtcgcgatgaagtttgattgcagtaagagaaatccatgtaaaggaataaaa
ctggaagatgttaatctgagttataagaatgaaccagctgctgaagcttcatgttctaat
gttgcaggaacaactactggtgtaattcaacctactagttgtttgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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