KEGG   Streptomyces avermitilis: SAVERM_3463
Entry
SAVERM_3463       CDS       T00126                                 
Symbol
uvrD1
Name
(GenBank) putative ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sma  Streptomyces avermitilis
Pathway
sma03420  Nucleotide excision repair
sma03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SAVERM_3463 (uvrD1)
   03430 Mismatch repair
    SAVERM_3463 (uvrD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sma03400]
    SAVERM_3463 (uvrD1)
Enzymes [BR:sma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAVERM_3463 (uvrD1)
DNA repair and recombination proteins [BR:sma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SAVERM_3463 (uvrD1)
   MMR (mismatch excision repair)
    Other MMR factors
     SAVERM_3463 (uvrD1)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_11 ResIII DEAD Birna_VP4
Other DBs
NCBI-ProteinID: BAC71175
NITE: SAV3463
UniProt: Q82HP5
Position
complement(4293057..4295642)
AA seq 861 aa
MSSLFDDSFLADLKPSRAHEEEPPPPPEDDHVPESVPDDLFGGKFDVPPDRDTYYRDGAP
RPAVDPATLLHGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAHLLGERHVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKRLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGVPGPGGGARPEDEPPREDDLEPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATT
ILLEQNYRSTQTILSAANAVIERNESRRPKNLWTNAGAGAQITGYVADTEHDEAQFVADE
IDRLTDAGEAKAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYL
RVLSNPEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFAQALRRVDEAYGMAARST
NAVKRFNTLMEDLRTIAESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAA
VALEFEQESGAGEEAATGDAAGDAAGDAAGDAPGGAPGAASGDLSAFLERVALVADSDQI
PDEEDGNGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRSLGQTKELEEERRLAYVGIT
RARERLYLTRSSLRSAWGQPSYNPPSRFLEEIPDAHLEWKRKGASAAPLSSGPASGVAAS
LSSSRSRSAVSGASGFATRRGGASEKPVASLAVGDRVTHDQFGLGTVVGVKGTGGNAEAT
IDFGDTKPKRLLLRYAPVEKL
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgagcagcctctttgatgacagcttcctggcggacctcaagccctcgcgggcccacgag
gaggagcccccgccgccgcccgaggacgatcacgtaccggagtcggttccggacgatctg
ttcggcgggaagttcgacgtgccgccggaccgggacacgtactaccgcgacggagccccc
cgccccgccgtggacccggccacgctcctgcacgggctgaacgagaaccagcgcgcggcc
gtggtgcacgccggttcccccctgctcatcgtggccggtgccggctccggcaagacgcgc
gtgctcacgcaccggatcgcgcacctgctgggtgagcgccatgtgcaccccggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctg
gtcggcccgcgcgccaacgcgatgtgggtgatgacgttccacagcgcgtgcgtgcgcatc
ctgaggcgtgaatcgaagaggctcgggttcacctcctccttctcgatctacgacgccgcc
gacagcaagcgtctgatggccctggtctgccgcgacctggacctcgaccccaagcgcttc
ccgccgaagtccttcagcgccaagatctcgaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgcagacggcttcgagaagaccctcgcccaggcgtacgccatg
taccagtcgcggctgcgtgaggccaacgcgctcgacttcgacgacctgatcatgacgacg
gtcaacctgctgcgggccttcccggacgtcgccgagcactaccgccgccgtttccgccac
gtcctcgtcgacgagtaccaggacacgaaccacgcgcagtacgccctggtcagggagctg
gtcggggttccgggaccgggtggcggcgcccgcccggaggacgagccgccccgcgaggac
gacctcgagcccgccgagctgtgcgtcgtgggtgacgccgaccagtcgatctacgccttc
cgcggcgcgaccatccgcaacatcctccagttcgaggaggactacccggacgcgacgacg
atcctcctggagcagaactaccgctccacccagacgatcctcagcgcggccaacgcggtc
atcgagcgcaacgagtcccgtcgccccaagaacctgtggaccaacgcgggcgccggcgcg
cagatcaccggctatgtcgccgacaccgagcacgacgaggcgcagttcgtcgccgacgag
atagaccggctgacggacgcgggcgaggcaaaggcaggagacgtcgccgtcttctaccgg
acgaacgcgcagtcccgtgtcttcgaagagatcttcatccgcgtcggcctgccctacaag
gtcgtcggcggtgtccgcttctacgagcgcaaggaggtccgggacgtcctggcctacttg
cgggtcctgtccaacccggaggactcggtcccgctgcgccgcatcctgaacgtgcccaag
cgcggcatcggcgaccgcgcggaagcgatgatcgacgccctctcccagcgcgagaagatc
agcttcgcgcaggcgctgcgccgcgtcgacgaggcgtacgggatggcggcccgctccacg
aacgccgtcaagcggttcaacacgctgatggaggacctgcggacgatcgccgagtcgggc
gcgggcccggcgacggtcctggaggccgtgctcgaacgcaccggctacctggcggagttg
caggcgtcgacggacccgcaggacgagacccgcatcgagaaccttcaggaactcgccgct
gtggcgctggagttcgagcaggagtccggggcaggggaggaggccgcgacaggcgatgcg
gcgggcgacgcggcaggcgacgcggcaggcgacgcgccgggtggtgcgccgggcgcggcg
tcaggtgatctctcggcgttcctcgagcgggtcgcgctcgtcgccgactccgaccagatc
ccggacgaggaggacggcaacggagtcatcaccctgatgaccctgcacaccgccaagggc
ctcgaattcccggtcgtcttcctcaccggcatggaggacggcgtcttcccgcacatgcgg
tcgctcggccagaccaaggaactggaggaggagcggcgcctcgcgtacgtcggcatcacc
cgcgcgcgggagcggctgtacctcacccgttcgtccctgcgcagcgcgtggggccagccc
tcgtacaacccgccgtcccgcttcctggaggagatcccggacgcgcatctggagtggaag
cggaagggggcgtccgctgctccgctgtcttcggggccggcctcgggcgtggcggcctcg
ctgtcgtcgtcgcgctcgcgctccgcggtctcgggggcgtccggcttcgccacgcgccgg
ggcggtgcgtccgagaagccggtggcctcactggcggtcggggaccgggtcacgcacgac
cagttcggcctcggcacggtggtcggcgtgaagggcacgggcgggaacgcggaggcgacg
atcgacttcggcgacacgaagccgaagcggctgctgctccggtatgcgccggtggagaag
ctttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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