KEGG   Serratia marcescens subsp. marcescens Db11: SMDB11_0516
Entry
SMDB11_0516       CDS       T03985                                 
Symbol
cydB
Name
(GenBank) cytochrome d terminal oxidase, subunit II
  KO
K00426  cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
Organism
smac  Serratia marcescens subsp. marcescens Db11
Pathway
smac00190  Oxidative phosphorylation
smac01100  Metabolic pathways
smac02020  Two-component system
Module
smac_M00153  Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:smac00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    SMDB11_0516 (cydB)
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SMDB11_0516 (cydB)
Enzymes [BR:smac01000]
 7. Translocases
  7.1  Catalysing the translocation of protons
   7.1.1  Linked to oxidoreductase reactions
    7.1.1.7  quinol oxidase (electrogenic, proton-motive force generating)
     SMDB11_0516 (cydB)
SSDB
Motif
Pfam: Cyt_bd_oxida_II
Other DBs
NCBI-ProteinID: CDG11100
Position
552313..553452
AA seq 379 aa
MFDYEVLRFIWWVLVGVLLIGFAVTDGFDMGVGILVRIIGKTDTERRVMINSIAPHWDGN
QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLAALFFRPVGFDYRSKLESSRWRNMWD
WGIFIGSFVPAVVFGVAFGNLLQGVPFHMDEYMRLFYTGNFFQLLNPFGLLAGVVSLTML
VTQGATYLQMRTTGEIHLRSRAAAQIATLIMAVCFLLAGVWLVKGIDGFVVTSALDTLAE
SNPMRKEVAHQAGAWLINFNKYPLLWALPALGVVLPLFTILFSRLEKGALAFVTSSLTIA
CVILTAGVTMFPFVMPSSTVPNVSLTMWDATSSLLTLKVMTVVAAIFVPIVLAYTSWSYY
KMFGRLDKNYIENNKHSLY
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgtttgactatgaagtactgcgatttatttggtgggtcctggttggcgttctgctgatc
ggcttcgccgtcaccgacggtttcgacatgggcgtcggcattctggtgcgcatcatcggc
aaaaccgacaccgagcgccgggtgatgatcaactccatcgctccgcactgggacggtaac
caggtgtggctgatcaccgccggcggcgcgctgttcgccgcctggccgatggtctacgca
gcggccttctccggcttctacgtcgccatgatcctggtgctggccgccttgttcttccgc
ccggtcggtttcgactaccgttccaagctggagagcagccgctggcgcaacatgtgggac
tggggcatcttcatcggctccttcgtgcctgcagtggtattcggtgtggcgttcggtaac
ctgctgcagggcgtgccgttccacatggacgagtacatgcgcctgttctacaccggcaac
ttcttccaactgctgaacccgttcggtctgttggcgggcgtggtcagcctgaccatgctg
gtcacccagggcgcgacctacctgcaaatgcgcaccaccggcgagatccacctgcgttca
cgcgctgcggcacagatcgcgacgctgatcatggcggtatgtttcctgctggcgggcgta
tggctggtgaaaggcatcgacggcttcgtcgtgacgtcggcgttggacaccctggcggaa
tccaacccgatgcgtaaagaagtggcgcatcaggccggtgcttggctgatcaacttcaac
aagtatccgctgctgtgggccttgcctgcactgggcgtagtgctgccgttgttcaccatc
ctgttctcgcgtctggagaagggcgcgctggcgttcgtcacctcgtcgttgaccatcgcc
tgcgtcatcctcaccgccggggtcaccatgttcccgttcgtgatgccgtcgagcactgtg
cctaacgtcagcctgaccatgtgggatgcgacctcgagcctgttgacgctgaaagtgatg
accgtcgtggcggcgatcttcgtgcctatcgttttggcgtacaccagctggtcgtactac
aaaatgttcggtcgcctcgacaagaactacatcgaaaacaacaagcattcgttgtactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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