KEGG   Serratia marcescens subsp. marcescens Db11: SMDB11_4272
Entry
SMDB11_4272       CDS       T03985                                 
Symbol
rffA
Name
(GenBank) lipopolysaccharide biosynthesis protein 1
  KO
K02805  dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
Organism
smac  Serratia marcescens subsp. marcescens Db11
Pathway
smac00541  O-Antigen nucleotide sugar biosynthesis
smac01100  Metabolic pathways
smac01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:smac00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    SMDB11_4272 (rffA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:smac01007]
    SMDB11_4272 (rffA)
Enzymes [BR:smac01000]
 2. Transferases
  2.6  Transferring nitrogenous groups
   2.6.1  Transaminases
    2.6.1.59  dTDP-4-amino-4,6-dideoxygalactose transaminase
     SMDB11_4272 (rffA)
Amino acid related enzymes [BR:smac01007]
 Aminotransferase (transaminase)
  Others
   SMDB11_4272 (rffA)
SSDB
Motif
Pfam: DegT_DnrJ_EryC1 Aminotran_1_2 Aminotran_5 Beta_elim_lyase Cys_Met_Meta_PP OKR_DC_1 DUF3053
Other DBs
NCBI-ProteinID: CDG14832
Position
4581376..4582506
AA seq 376 aa
MIPFNAPPVVGTELEYMQAAMSSGKLCGDGGFTRRCQQWMEQRFGSAKVLLTPSCTASLE
MAAILLDIQPGDEVIMPSFTFVSTANAFVLRGAKVVFVDLRPDTMNIDETKIEAAITDKT
RAIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGKALGTIGHIGCFSFHET
KNYTAGGEGGATLVNDPALIDRAEVIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA
AYLWGQLEVAERINQRRLSLWQKYYDSFLPLAQAGRIELPTVPADCEHNAHMFYIKLRDI
EERTAFIDYLKEAEIMTVFHYIPLHACPAGEQFGRFAGEDRYTSQESERLVRLPLFYNMS
DVNQRTVINTILSFFA
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgattccatttaacgctccaccggttgttggcactgaactggaatatatgcaggctgcg
atgagcagcggcaagttgtgcggcgacggcggctttacccgtcgctgccagcagtggatg
gaacagcgtttcggcagcgcgaaagtgttgttgacgccttcctgcaccgcgtcgttggaa
atggccgccatcctgctggatattcagccgggtgacgaagtgatcatgccgagctttacc
ttcgtttcaaccgccaacgcctttgtgctgcgcggtgccaaagtggtgttcgtcgacctg
cggccggacaccatgaacatcgacgaaaccaaaatcgaagcggcgatcaccgataaaacc
cgcgcgatcgtgccggtacactacgccggcgtcgcctgcgagatggataccatcatggcg
ctggcgaagaaacataacctgttcgtggtggaagacgccgcgcagggcgtgatgtcgacc
tacaaaggcaaggcattgggcaccatcggtcatatcggctgcttcagtttccatgaaacc
aaaaactataccgccggcggcgaaggcggcgcgacgctggtgaacgatccggccctgatc
gatcgggcggaagtcatccgcgagaaaggcaccaaccgcagccagttcttccgtggccag
gtcgacaaatatacctggcgcgacatcggctccagctacttgatgtctgacctgcaggcc
gcctatctgtggggtcagctggaagtggcggagcgcatcaatcagcgtcgcctgtcgctg
tggcagaagtactacgacagtttcctgccgttagcgcaagccggccgtatcgagctgccg
actgtgccggcggactgcgagcacaatgcgcacatgttctatatcaagctgcgcgatatc
gaagagcgcaccgcatttatcgactatttgaaagaagccgagatcatgacggtgtttcac
tatatcccgctgcatgcgtgcccggccggcgaacagtttggccgctttgccggtgaagat
cgctataccagccaggaaagtgagcgtctggtgcgcttgccgctgttctacaatatgtct
gatgtcaatcagcgtacggtaatcaataccatcctgagcttctttgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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