KEGG   Serratia marcescens subsp. marcescens Db11: SMDB11_4290
Entry
SMDB11_4290       CDS       T03985                                 
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
smac  Serratia marcescens subsp. marcescens Db11
Pathway
smac03420  Nucleotide excision repair
smac03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SMDB11_4290 (uvrD)
   03430 Mismatch repair
    SMDB11_4290 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smac03400]
    SMDB11_4290 (uvrD)
Enzymes [BR:smac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SMDB11_4290 (uvrD)
DNA repair and recombination proteins [BR:smac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SMDB11_4290 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     SMDB11_4290 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_22 PhoH
Other DBs
NCBI-ProteinID: CDG14849
Position
4601070..4603232
AA seq 720 aa
MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLEANLPQDFQILDSDDQL
RLLKRIIKALNVDEKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNSIQYAWIRLLAGGN
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILKAANTLIANN
DGRMGKNLWTEGGEGEPISLYCAFNELDEARFVVNRIKTWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRELMQDKVLAGRAASALQRFIELVESLAHETADMPLHVQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVNHRRMG
TPISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQIAFPGEGIKWLVAAYARLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtctccgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggcggcg
ccgcgcagcaacctgttggttctggccggagcgggcagcggcaagacgcgggtgctggtg
caccgcatcgcctggctgctgtcggtggagaactgctcaccgtattcgatcatggcggtg
accttcaccaacaaggcggcggcggaaatgcgccaccgtatcgaacatctgatcggcacc
agccagggcggcatgtggatcggcaccttccacggcctggcgcaccgcctgttgcgcgcc
caccacctggaggccaacctgccgcaggatttccagatcctcgacagcgacgaccagctg
cggctgctcaagcgcatcatcaaggcgctgaacgttgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggcaagaaagacgagggcctgcggccacagcacgtcgag
acatacaacaacccggtagaggccacctggctgcgcatctatcaggcctatcaggaagcc
tgcgatcgcgccgggctggtggatttcgccgagctgctgctgcgcgcgcacgaactgtgg
ctgaataagccgcatatcctcaaccactaccgcgagcgtttcaccaacgtgctggtggac
gaattccaggataccaacagcatccagtacgcctggatccgcctgctggcgggcggcaac
agcaacgtgatgatcgtcggcgacgatgaccagtcgatctacggctggcgcggcgcgcag
gtggaaaacatccagcgcttcctgaaggacttccccggcgcggaaaccatccgcctggag
cagaactaccgttccaccagcaacatcctgaaagcggccaacaccctgatcgccaacaac
gacgggcgcatgggcaaaaatctgtggaccgaaggcggcgaaggcgagccgatttccctc
tactgcgccttcaacgaactcgacgaagcgcgcttcgtggtcaaccgcatcaagacctgg
caagacaacggcggcgcgctgaacgactgcgccatcctgtaccgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcagacggcgatgccgtaccgcatctacggtggccag
cgcttcttcgaacgccaggaaatcaaggatgcgctggcttacctgcgcctcatttccaac
cgcaacgacgatgcggccttcgagcgcgtggtcaacaccccgacgcgcggcatcggcgat
cgcaccctcgacgtggtgcgccaggcggcgcgcgatcgccagctgacgctgtggcaggcg
acgcgcgagctgatgcaggacaaagtgttggccggccgcgccgcgtcggcgctgcagcgc
tttatcgaactggtggagtcgctggcgcatgaaaccgctgacatgccgctgcacgtgcag
accgaccgggtgatccgcgattccgggctgttcatcatgtatgagcaggaaaagggcgaa
aaggggcaggcgcgtatcgaaaaccttgaggaactggtgacggcgacgcgtcagttcagc
tatcaggaagaagatcaggatctgatgccgctgcaggcgttcctgtcgcatgcggcgctg
gaagcgggcgaaggtcaggccgacgcctatcaggacgcggtgcagctgatgaccctacac
tcggccaagggcttggagttcccgttggtgtttatcgtcggcatggaagaaggcatgttc
ccgagccagatgtcgctggatgaaggcggccgtctggaggaggagcgccgtctggcctat
gtgggcgtaacgcgcgccatgcagaagctgacgctgacctatgccgaaacgcgccgtctg
tacggcaaagaggtttaccatcggccgtcgcgctttatcggcgaactgccggaagagtgt
gtggaagaagtgcgcctgcgcgccagcgtatcgcgcccggtcaatcaccgccgcatgggc
acgccgatcagcgagaacgataccggctacaagctgggccagcgcgtgcgccatcccaag
tttggcgaaggcaccatcgtcaatctggaaggcagcggcgagcacagccggttgcagatc
gctttcccgggcgagggcatcaagtggctggtggcggcctacgctcgcctagaaacggta
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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